Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3242g00007 ATGGATGTAACCAAGTTACAAAACATTGATGATGATGACAAGAAAGAAGATGAAGTTGTGCTACCTGGATTCAGATTCCATCCAACGGATGAAGAGCTTGTTGGATTTTATCTGAGAAGAAAGGTGGAGAAGAAGCCTCTAAGAATTGAACTCATCAAACAGATTGACATCTACAAATACGATCCATGGGATCTTCCAAAAGCGAGTTCTGTGGGGGAGAAGGAGTGGTACTTCTTTTGCATAAGAGGGAGAAAATACAGGAACAGCATAAGGCCTAATAGAGTAACAGGGTCTGGATTTTGGAAAGCCACAGGGATTGATAAGCCTATATACTGTGTTAAAGAACCCAATGAATGCATTGGCTTAAAGAAATCATTGGTTTACTACCGTGGAAGTGCTGGTAAAGGCACCAAAACTGATTGGATGATGCACGAATTTCGCCTCCCACTTCCACCAAATCAAAAAATTAGCAACAAACCACAACCTAACGATGCCAATCATCTTCATCAAGCTGAAGTGTGGACGCTATGCCGAATATTCAAACGAGTCCCATCTTACAAGAAGTACACACCAAATTTGAAAGACTCAGCAGCAGAAGGAGCAACGACCAAGTCAAACTCTTCAAGTTCCAAAACATGCAGCTTAGAATCTGACAATGGCAAGCCATACTTGACTTTCACAAACTCATCACTCATTCAACAAAATGAAAGGAAACCAGTTATTGGACATGTTGACCAACTTAACCACTTATTTCTAGGTCAGTTAGGCAATGTAGCTCAGACTCCAACATCCAGTTTTTGGAATCATCAGAATGTCCAATTTCCTAATGATAATTGGGATGATCTCGCATCTGTGGTTCAGTTTGCTATTGATCCATCCAGGGGGACTATTCTGAATAATTAA 903 0.4031 MDVTKLQNIDDDDKKEDEVVLPGFRFHPTDEELVGFYLRRKVEKKPLRIELIKQIDIYKYDPWDLPKASSVGEKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYCVKEPNECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPLPPNQKISNKPQPNDANHLHQAEVWTLCRIFKRVPSYKKYTPNLKDSAAEGATTKSNSSSSKTCSLESDNGKPYLTFTNSSLIQQNERKPVIGHVDQLNHLFLGQLGNVAQTPTSSFWNHQNVQFPNDNWDDLASVVQFAIDPSRGTILNN 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3242g00007 300 MobiDBLite consensus disorder prediction 196 216 - -
Mupr3242g00007 300 ProSiteProfiles NAC domain profile. 20 182 IPR003441 GO:0003677|GO:0006355
Mupr3242g00007 300 Gene3D NAC domain 29 185 IPR036093 GO:0003677|GO:0006355
Mupr3242g00007 300 FunFam NAC domain-containing protein 35 29 185 - -
Mupr3242g00007 300 Pfam No apical meristem (NAM) protein 22 148 IPR003441 GO:0003677|GO:0006355
Mupr3242g00007 300 SUPERFAMILY NAC domain 19 181 IPR036093 GO:0003677|GO:0006355
Mupr3242g00007 300 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3242g00007 Mupr-Chr3242 39442 42687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3242g00007 9 183 NAC Transcription Factor Family AT5G39820 59.259 1.17e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr3242g00007 NAM 4.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3242g00007 - - gmx:100795553 484.182