Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3240g00001 ATGAGGAAGCCTAGTTGTGATATCAAAGAGTTGAACAAAGGAGCTTGGTCCAAACAAGAAGACCAGAAACTCATAGATTATATCAAGAAACATGGCGAGGTTTGCTGGCGTACACTCCCTCAGGCAGCAGGTTTACTTCGGTGTGGTAAAAGTTGTAGACTGAGATGGATAAACTATCTACGGCCAGACCTTAAAAGGGGCAACTTTGCTGAAGATGAAGAAGATCTCATAATCAAGCTTCATGCGCTGCTAGGCAACCGGTGGTCACTGATAGCTGGGAGATTGCCCGGACGTACAGATAATGAAGTGAAGAACTATTGGAATTCTCACATAAGAAGAAAGCTGATTGGCAAAGGCATTGATCCAAATAACCATCGATTAAACCACAAAATCCCTTTTCTTCAGAATCCATCACCCATATCTGATGATTCAAAACCCTTTGGCAAGAACGAGACAAGTAAATCAGCTCATTATGGTGATGTCTCGGAAGTTGCAAGTGGCGAGGCCGAGTCATCATGTGCCCTACCAGATTTAAACCTTGACATCTCCATCGCCATTCCTTCAGCTTCGCTCACTATTTCTGAAAACAATCTTAAACCGTTTCATGAATCTAATTCGTCCAGGAAACTGCATTTTGATTCCCCTTCAACACTTCTTCTGTTTCAGTAG 669 0.4275 MRKPSCDIKELNKGAWSKQEDQKLIDYIKKHGEVCWRTLPQAAGLLRCGKSCRLRWINYLRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRRKLIGKGIDPNNHRLNHKIPFLQNPSPISDDSKPFGKNETSKSAHYGDVSEVASGEAESSCALPDLNLDISIAIPSASLTISENNLKPFHESNSSRKLHFDSPSTLLLFQ 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3240g00001 222 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Mupr3240g00001 222 FunFam MYB-related transcription factor 12 65 - -
Mupr3240g00001 222 FunFam MYB transcription factor 67 128 - -
Mupr3240g00001 222 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Mupr3240g00001 222 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Mupr3240g00001 222 Gene3D - 5 66 - -
Mupr3240g00001 222 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Mupr3240g00001 222 CDD SANT 68 111 IPR001005 -
Mupr3240g00001 222 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 153 - -
Mupr3240g00001 222 MobiDBLite consensus disorder prediction 132 155 - -
Mupr3240g00001 222 CDD SANT 15 60 IPR001005 -
Mupr3240g00001 222 Gene3D - 68 132 - -
Mupr3240g00001 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Mupr3240g00001 222 MobiDBLite consensus disorder prediction 132 146 - -
Mupr3240g00001 222 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Mupr3240g00001 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Mupr3240g00001 222 SMART sant 65 113 IPR001005 -
Mupr3240g00001 222 SMART sant 12 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3240g00001 Mupr-Chr3240 5164 6982 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3240g00001 2 187 MYB Transcription Factor Family AT4G38620 56.039 9.66e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr3240g00001 Myb_DNA-binding 1.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3240g00001 K09422 - gmx:100814923 370.163