Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3238g00004 ATGATGAGGCTCAACTTGCTCATGCTTTGCTTATCCGCCTTGTTATATGCTGTTAATGCATTGAACACTGATGGGGTAGCTCTTCTATCACTTCTAAGGCATTGGACATTTGTGCCTCATCCCATAAACTCCAGCTGGAATGCTTCTGATTCCACTCCATGCTCTTGGTTGGGAGTCCAGTGTGACAATAACCACAATGCAATCTTTCTTAATCTCTCTGGACACTCAATTTCAGGTCCATTAGGACCTGAAATAGCACACTTGAGTCACTTGCAAACACTTGACTTGACCTTTAACAACTTCTCAGGGAAAATACCTCCTGAGTTAGGAAATTGTAGTAAACTTGAGAACTTGAACCTTTCTGATAACAGCATCAGTGGACAAATACCAGATAGTTTGAGAAACTTGCTGAATTTAGTGTCTTTTAGCGTTATGGACAATATACTAACCGGTCAAATTCCTGAGTTCTTGTTTCAACTCCAACACTTGGAATATCTTCTCCTGAGCAACAACTATCTGACTGGTCCCATTCCAATGAATGTTGGGAACAGTACAGAAATTTTGATGCTCTATCTGGATAACAATCAGTTGTCAGGAATGATTCCCCCATCCATTGGAAACTGCAGTAAATTAGTAGAATTGCTTTTGGATTATAACCAGTTGCATGGAGTTTTACCTGAGAGCCTTAATAATCTCCAAAGTGTTGTTTATTTATCTGTCAACAATAATGGACTTGAGGGTACCATTCCATTATTGGGTTCTGGCAGATGTAAGAGTTTATATTATTTGGACCTGTCATTCAATAAATTTAGTGGGGGCATATCTTCAAGCTTGGGAAATTGCAGCGGATTAACAGAATTTTATGCTCTCAACAATAGTTTAGGAGGCAGCATCCCATCATCCTTGGGCCAACTAAGTGAACTTTCTACTCTTCGCCTTGAAACCAATAATTTGTCTGGACAAATACCTCCAGAAATTGGTAACTGTAGGTCCTTAAAAGTGTTGATGTTAAGTAACAACGAACTTGAGGGCGAGCTTCCAAGTGAATTAGGAATGCTAAGTCAATTACAAGATCTTAGATTGAATTTCAATCATTTGACAGGTGGAATTCCAGTGAGCCTTTGGAAAATTCCTAGTCTTGAGAACGTGATTGTGCATTACAATAACCTTTCTGGGGAACTACCTTTAGAATTGACAGAACTCAAACGACTGAAAAGCATCACATTGTATAAAAACCAATTCTCTGGAGTCATTCCTCAAAACTTAGGAATCAATAGCAGTTTAGTGCAATTGGATGTCTCGTATAATTACTTCACTGGCACTATCCCATCTAATCTTTGCTTTGGACAGCAATTAGAAAGGCTACTCATGGCTTCAAATCAATTTCAAGGTGGTATACCTCTTGACATAGGAAGATGTACAACTCTTGCTAGGTTACGCCTCGATGGAAATAACTTAACAGGACCTCTACCTGATCTTACAAGCATTAGCAGTCTCACCTACATGGACATCAGTGAGAACAATTTCAGAGGAGCGATTCCATCAAGTTTGGGAAACTTCACAAATCTTACTGTTCTTATTTTGTCCCACAACAATTTTTCAGGGCACATACCCTTTGAGCTAGGAAGCCTTGTGAATCTTCAAAGGCTGAACCTTTCTCACAACAAGTTGGAAGGTCCTTTGCCACCTGAGCTGTCCAATTGTAACAAAATGGTTTACTTTGATGCCGAGTTCAATTCTCTAAATGGCTCATTCCCATCAAGTTTGAGAACTTGGACAGGGTTAACCACATTAAACTTAGGGGAAAATCATTTGACTGGTGGTATCCCAACTTTCTTATCAGAATTTAAAGGCCTTTTTTATATAAATCTTGGGGGGAATTCTTTTGCTGGCCAAATTCCTGGATCAATTGGTGAGTTGCAGAATCTTTTTTATGGGTTGAACCTAAGTGCTAATGGGTTGACAGGTGAAATTCCTCCAGAGATTGGGAAACTGAAAATGCTGCAAAGCCTGGATATTTCTGTTAACAATCTGACTGGAATGATTGAAGTTCTTGAAGATCTTTCTTCACTGGTTGCACTCAATATTTCATACAATTCCTTTTCTGGTCCTCTTCCAGACACACTGCTGAACTTGCTCCATTCTTCTCCTTCATCATTCTTGGGCAATCCTGGCTTATGTGTCAGATGTCTTCCATCACATGGGCTGAACTGTTCCAAAGGTAACAGCTTGAAGCCATGTGATGAGAGAAATTCCACACATCCAAAAGGGCTGAGTAAATTTAAAATTGTGATGATAGCACTTGGATCCACACTACTTGTAACATTTCTGTCACTTGGTCTTGTTTATGTGCTACACTACAAGCAGGAAATTTTCTCCGAACAACGGTCGTCTTCTTTCCTCAAAAAAGTGATGAAGGTTACAGACAACCTTAATGATAGGCATATTATTGGAAGAGGAGCACATGGAGTTATCTACAAAGTTGAATTCAGTCCAGACGAAGTTTTTGCTATAAAGAAAATACCCTTTGCAGATAACAAAGGTCAGATCACAAGCATGAGCACAGAGATTGAAACCACTGAGAAGATTAAGCACCGAAATCTGGTAAGAACAAAAAACTTCTGGTTAAGAAAGGACTGTGGTCTAATTCTTTACAAGTACATGAAAAATGGAAGTCTTCATGATGTTCTGCATGAGAAGTATCCACCACCATCTTTGGAGTGGAGTGTCCGCTATAAGATTGCTGTTGGAATTGCACATGGACTTGAATATCTCCATCATGATTATGATCATGTCATAGTGCACAGAGACATCAAGCCAAAGAATATACTTTTGGATTCTGATATGGAGCCTCATATTGCTGATTTTGGCATTGCCACACTTCAAGACCATTCCTCTACTTCATTACAATCTTTCACTGTTCCTGGAACAGTTGGATATATTGCACCAGAGAATGCTCATTCAACAGTAATGAGTAGAAAGTCTGATGTATTTAGTTATGGAGTGGTTTTGCTTGAGCTAATAAGCAGAAAGAAGGTGCTAGATGATCCATCATTTATGGATGAAACAAATCTTGTAGGGTGGGTTAAATCTGTCTGGGAGAAAACAAGCAGCATTGATGGAATTGTTGACTCAAGCCTTGAACAAGAATTTTTGGCCTCAAATGTGAGGGAACAAGTTGAACAAGTTCTTTTTCTGGCATTGAGATGTACTGAGAAGGATCCAGGTGAGAGACCAACAATGAGAGAAGTCGTCAAGGACTTGATTGTTAGATGCAAATCTCCTCACAAGACCTAG 3297 0.3937 MMRLNLLMLCLSALLYAVNALNTDGVALLSLLRHWTFVPHPINSSWNASDSTPCSWLGVQCDNNHNAIFLNLSGHSISGPLGPEIAHLSHLQTLDLTFNNFSGKIPPELGNCSKLENLNLSDNSISGQIPDSLRNLLNLVSFSVMDNILTGQIPEFLFQLQHLEYLLLSNNYLTGPIPMNVGNSTEILMLYLDNNQLSGMIPPSIGNCSKLVELLLDYNQLHGVLPESLNNLQSVVYLSVNNNGLEGTIPLLGSGRCKSLYYLDLSFNKFSGGISSSLGNCSGLTEFYALNNSLGGSIPSSLGQLSELSTLRLETNNLSGQIPPEIGNCRSLKVLMLSNNELEGELPSELGMLSQLQDLRLNFNHLTGGIPVSLWKIPSLENVIVHYNNLSGELPLELTELKRLKSITLYKNQFSGVIPQNLGINSSLVQLDVSYNYFTGTIPSNLCFGQQLERLLMASNQFQGGIPLDIGRCTTLARLRLDGNNLTGPLPDLTSISSLTYMDISENNFRGAIPSSLGNFTNLTVLILSHNNFSGHIPFELGSLVNLQRLNLSHNKLEGPLPPELSNCNKMVYFDAEFNSLNGSFPSSLRTWTGLTTLNLGENHLTGGIPTFLSEFKGLFYINLGGNSFAGQIPGSIGELQNLFYGLNLSANGLTGEIPPEIGKLKMLQSLDISVNNLTGMIEVLEDLSSLVALNISYNSFSGPLPDTLLNLLHSSPSSFLGNPGLCVRCLPSHGLNCSKGNSLKPCDERNSTHPKGLSKFKIVMIALGSTLLVTFLSLGLVYVLHYKQEIFSEQRSSSFLKKVMKVTDNLNDRHIIGRGAHGVIYKVEFSPDEVFAIKKIPFADNKGQITSMSTEIETTEKIKHRNLVRTKNFWLRKDCGLILYKYMKNGSLHDVLHEKYPPPSLEWSVRYKIAVGIAHGLEYLHHDYDHVIVHRDIKPKNILLDSDMEPHIADFGIATLQDHSSTSLQSFTVPGTVGYIAPENAHSTVMSRKSDVFSYGVVLLELISRKKVLDDPSFMDETNLVGWVKSVWEKTSSIDGIVDSSLEQEFLASNVREQVEQVLFLALRCTEKDPGERPTMREVVKDLIVRCKSPHKT 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3238g00004 1098 FunFam Serine/threonine-protein kinase-like protein CCR4 888 1098 - -
Mupr3238g00004 1098 Pfam Leucine rich repeat 498 557 IPR001611 GO:0005515
Mupr3238g00004 1098 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 299 394 - -
Mupr3238g00004 1098 ProSitePatterns Protein kinases ATP-binding region signature. 817 840 IPR017441 GO:0005524
Mupr3238g00004 1098 Gene3D Ribonuclease Inhibitor 253 348 IPR032675 -
Mupr3238g00004 1098 Gene3D Ribonuclease Inhibitor 21 180 IPR032675 -
Mupr3238g00004 1098 Pfam Leucine Rich repeat 87 103 IPR001611 GO:0005515
Mupr3238g00004 1098 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 409 736 - -
Mupr3238g00004 1098 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Mupr3238g00004 1098 ProSiteProfiles Protein kinase domain profile. 811 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3238g00004 1098 Pfam Leucine Rich Repeat 114 136 IPR001611 GO:0005515
Mupr3238g00004 1098 SUPERFAMILY Protein kinase-like (PK-like) 795 1089 IPR011009 -
Mupr3238g00004 1098 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 20 178 - -
Mupr3238g00004 1098 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 401 1088 - -
Mupr3238g00004 1098 SUPERFAMILY RNI-like 418 715 - -
Mupr3238g00004 1098 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 179 274 - -
Mupr3238g00004 1098 ProSiteProfiles Leucine-rich repeat profile. 114 137 IPR001611 GO:0005515
Mupr3238g00004 1098 SUPERFAMILY RNI-like 70 448 - -
Mupr3238g00004 1098 Gene3D Ribonuclease Inhibitor 350 737 IPR032675 -
Mupr3238g00004 1098 ProSitePatterns Serine/Threonine protein kinases active-site signature. 933 945 IPR008271 GO:0004672|GO:0006468
Mupr3238g00004 1098 Gene3D Phosphorylase Kinase; domain 1 785 887 - -
Mupr3238g00004 1098 SMART LRR_typ_2 665 687 IPR003591 -
Mupr3238g00004 1098 SMART LRR_typ_2 520 541 IPR003591 -
Mupr3238g00004 1098 SMART LRR_typ_2 208 231 IPR003591 -
Mupr3238g00004 1098 SMART LRR_typ_2 688 712 IPR003591 -
Mupr3238g00004 1098 SMART LRR_typ_2 544 568 IPR003591 -
Mupr3238g00004 1098 SMART LRR_typ_2 353 377 IPR003591 -
Mupr3238g00004 1098 SMART LRR_typ_2 305 329 IPR003591 -
Mupr3238g00004 1098 SMART LRR_typ_2 160 184 IPR003591 -
Mupr3238g00004 1098 SMART LRR_typ_2 88 112 IPR003591 -
Mupr3238g00004 1098 SMART serkin_6 811 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3238g00004 1098 Gene3D Ribonuclease Inhibitor 182 252 IPR032675 -
Mupr3238g00004 1098 Gene3D Transferase(Phosphotransferase) domain 1 888 1095 - -
Mupr3238g00004 1098 Pfam Protein kinase domain 814 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3238g00004 Mupr-Chr3238 25113 28519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3238g00004 12 1086 Receptor kinase-like Gene Family AT1G73080 49.177 0.0 965
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr3238g00004 Pkinase 9.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3238g00004 - - qsu:112010432 1321.99