Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3230g00008 ATGGGGGAAGAGGTGAAGACGAGCGAGTACGACGAAGAGCGCGTGATGGAGTGGGAGGCGGGTCTTCCAACCGCCAACGATCTCACGCCTCTCTCTCAGCCGCTGATCCCGCCAGAGCTCGCAACCGCCTTCAGCATCTCGCCGGAGCCACACCGCACCCTCCTCGACGTCAACCGCGCCTCGCGCAACACGCTCTCCACGCTCCGAGGCGGTGGGAGCGTGCACCAGGCGTTCTCCTCCTCCAACAACCACCAGCACCAGCACCAGCACCTGGAAGAGGAGGAGGAGGAGGAGGAGGACACCGATCGCGACGGCTCGGGGTCGGATTCCCGGAAGCAGCGGAAGATCGACTGCGCCGAGGAGGCGGACTCGGCGGTGCGGACGGAGAACTCGGCGGAGCGGACGGCGGTGAAGCGGCCGCGGCTTGTGTGGACCCCGCAGCTTCACAAGCGGTTCGTGGACGTGGTGGCGCACCTCGGGATCAAGAACGCGGTGCCGAAGACGATTATGCAGTTGATGAACGTGGAAGGGTTGACCCGCGAGAATGTGGCGAGCCATCTCCAGAAGTATAGGCTCTACTTGAAGCGGATGCAGGGTCTCTCCAACGAGGGTCCTTCTTCCTCTGATCAGTTATTCGCTTCCACACCCGTGCCTCAGAGTTTGCATGACTCTGCCCCTCCCAGTACCCATACCCATTCCCATTCCCATACCCATACCCATACCCATGCCAATGGCCATCTCCCTGTTCCCATGATGTCCATGCCCTATCCCCCTCCCATGATATTCAAACGCTTGATTATTGGTAGTAACTTTCTGAGAAGGGAGGTAGCTGCATTGATTGATTACCCTGGAATTCACACAAACGGAATCTCGAGGAATGGGAATGGAACGGGGATTTGTATCTTGTATATATAA 915 0.5891 MGEEVKTSEYDEERVMEWEAGLPTANDLTPLSQPLIPPELATAFSISPEPHRTLLDVNRASRNTLSTLRGGGSVHQAFSSSNNHQHQHQHLEEEEEEEEDTDRDGSGSDSRKQRKIDCAEEADSAVRTENSAERTAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHDSAPPSTHTHSHSHTHTHTHANGHLPVPMMSMPYPPPMIFKRLIIGSNFLRREVAALIDYPGIHTNGISRNGNGTGICILYI 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3230g00008 304 Coils Coil 81 101 - -
Mupr3230g00008 304 NCBIfam myb-like DNA-binding domain, SHAQKYF class 140 192 IPR006447 GO:0003677
Mupr3230g00008 304 MobiDBLite consensus disorder prediction 204 232 - -
Mupr3230g00008 304 MobiDBLite consensus disorder prediction 104 136 - -
Mupr3230g00008 304 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 13 255 IPR044841 GO:0003700|GO:0006355
Mupr3230g00008 304 MobiDBLite consensus disorder prediction 204 249 - -
Mupr3230g00008 304 MobiDBLite consensus disorder prediction 66 85 - -
Mupr3230g00008 304 Pfam Myb-like DNA-binding domain 143 191 IPR001005 -
Mupr3230g00008 304 Gene3D - 135 198 - -
Mupr3230g00008 304 FunFam Two-component response regulator 135 198 - -
Mupr3230g00008 304 SUPERFAMILY Homeodomain-like 137 196 IPR009057 -
Mupr3230g00008 304 MobiDBLite consensus disorder prediction 66 136 - -
Mupr3230g00008 304 MobiDBLite consensus disorder prediction 1 18 - -
Mupr3230g00008 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 136 195 IPR017930 -
Mupr3230g00008 304 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3230g00008 Mupr-Chr3230 80087 82249 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3230g00008 1 223 G2-like Transcription Factor Family AT3G46640 62.195 3.99e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr3230g00008 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3230g00008 - - aprc:113858844 403.675