Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3229g00008 GTGGCTACTACAAGGAGGTTTCCTTCAGATTCCGGTGCGTTTGCTGACTGGTCAGCCCCGCCCTCCGCAGTCTCCGGCCGCGCTGACGAGCTCTCCCTCGGCTTCAATGCTTCATCCGCCGCCGCGCACGGCGGCGCAGCCATGTGGCCGGGGGCATCCAGGTCGTTCAACTACAACCTGGCGCCACACCACGACATCTTCGTGGTGGCACCTGCCTCCTCCTTCCACCACCACAACGACGCCGTTTTGTCCGATCCGAACGACAACAACGGCTCCAACCCCGCCACCGCGCTCGGCGTCAACGTTTTCCCTCTTCTAACCGCCGCGCCATGCCTCGCGCCTCCCAGCATGGAGAGCGAGGGCATAATGGGAAACATCGGTAACCACAGCCACCGCAACAGAATTCAGTTATGGCAAGGGCACGAGTCTCCCCCGCAGCAACACGGCGAGGGCATAATGGGAAACAATCACAACCATAACCATAACCATACTCATAACAATAACCACCGTAACAGAATTCAGTTATGGCAGGATCACGACCAGGAGTCTCCGCCGCCGCAGCAGCAGCACGGTGACAAGCACGGTGCGGAACACGAGGCGCGTGGAGACGCGAGCGGGAGCAGCACGTGCCAGGACTGTGGGAATCAGGCCAAGAAGGATTGCAGTCATGGGAGGTGCAGGACGTGTTGCAAGAGTCGGGGCTTCGATTGCACTACGCACGTGAAGAGCACGTGGGTGCCCGCGGCGCGCCGGAGGGAGCGCCAGCTCATGGCGGTGGCGGCAGCGGCGGCGGTTGGGTCTAGTGGGTCCACTTCCGGTGCCAAGAAACCTAGGCTCGTTGCTTCCCAGACCACCACTACTTCGCATACTTCCACGTCAAATAATACCACTCCTCCGAGGAGTTTCGACACTGGTTCTAGCCACCAAGATGTGGGTTTCAAGGAGTCACTACCTTGTCAAGTGCGCGCACCTGCGGTATTCAAGTGTGTTCGTGTGACCGCAGTGGATGATGGAGAAGATGAGTTTGCCTATCAAGCTGTGGTGAAGATTGGTGGCCATGTGTTCAAAGGGTTTCTTTATGATCAAGGGGTTGAGGACAAAGATGGGTATCCCAATTTATCTGAACTGCATTTGGGTGGAGGTGGAAGTGATGGGGGTGGTAGAAATAATGGGGTTTCATCTTCATCTCCATTGGTGGATCCTTCTCATGTCTATGCAGCTTCGGGTGGAGGGTTACTTGGAGGGTCATCAAACTATGGTAATCCAATAAAT 1272 0.5692 VATTRRFPSDSGAFADWSAPPSAVSGRADELSLGFNASSAAAHGGAAMWPGASRSFNYNLAPHHDIFVVAPASSFHHHNDAVLSDPNDNNGSNPATALGVNVFPLLTAAPCLAPPSMESEGIMGNIGNHSHRNRIQLWQGHESPPQQHGEGIMGNNHNHNHNHTHNNNHRNRIQLWQDHDQESPPPQQQHGDKHGAEHEARGDASGSSTCQDCGNQAKKDCSHGRCRTCCKSRGFDCTTHVKSTWVPAARRRERQLMAVAAAAAVGSSGSTSGAKKPRLVASQTTTTSHTSTSNNTTPPRSFDTGSSHQDVGFKESLPCQVRAPAVFKCVRVTAVDDGEDEFAYQAVVKIGGHVFKGFLYDQGVEDKDGYPNLSELHLGGGGSDGGGRNNGVSSSSPLVDPSHVYAASGGGLLGGSSNYGNPIN 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3229g00008 424 MobiDBLite consensus disorder prediction 179 224 - -
Mupr3229g00008 424 MobiDBLite consensus disorder prediction 265 309 - -
Mupr3229g00008 424 NCBIfam putative zinc finger domain, LRP1 type 209 251 IPR006510 -
Mupr3229g00008 424 MobiDBLite consensus disorder prediction 264 309 - -
Mupr3229g00008 424 MobiDBLite consensus disorder prediction 141 161 - -
Mupr3229g00008 424 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 82 408 IPR007818 GO:0003700|GO:0006355
Mupr3229g00008 424 MobiDBLite consensus disorder prediction 141 167 - -
Mupr3229g00008 424 MobiDBLite consensus disorder prediction 185 201 - -
Mupr3229g00008 424 Pfam Domain of unknown function (DUF702) 207 365 - -
Mupr3229g00008 424 MobiDBLite consensus disorder prediction 371 400 - -
Mupr3229g00008 424 NCBIfam LRP1 C-terminal domain 317 364 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3229g00008 Mupr-Chr3229 56177 58362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3229g00008 206 422 C2H2 Transcription Factor Family AT1G75520 40.175 9.79e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mupr3229g00008 DUF702 2.1e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3229g00008 - - gmx:100816514 543.888