Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3225g00001 ATGATTGTTACTCGTTCTGCTTTGATGCTCCATCTCCAATACCCACCAATTATTCGCTACCATTTCTTCTCCCATCTCAACTATGCCCACACCTCATTCGTTAAATCCACCTTGCCGTCTCTATTCAAACCTCACTCCTTCTCTCGAACCACTCCAAGCCAAACGCAAACCAGAGCTTTTGTAACCGCTCTTGCATCATCACAAGGTTCCAAGGCCAGAGACACTTTCTTTGCCGAAGAAAACGTTTCGTGGAGTTCACTCGGTCTCTCTGATACCATTTCTCGAGCGCTTTCTAACATTGGCCTCACTACACCCTCTCTCGTTCAGGCTTCTTCTGTACCGTCTGTGCTGTCAGGGAAGGATGTTATTATTGCTGCGGAGACTGGGAGTGGTAAGACATACAGTTATCTAGTTCCTCTAATAGATAAGCTTAGGGACAACCAGGAACATTCTCTATATGCTGTGTCTGATCAAGAAGTGAGCTCGCCACAGAAAGTTCTGCTCGTTCTTTGTCCAAATGTGCAACTTTGTGAGCAGGTAGTGAGGATGGCTAACAGTCTCTGTAGAGACAATGGTGAGACAATAGTTAGTGTGGCAGCCATTTGTGGCAGACAGGGATGGCCAATACGGGAACCTGATGTCATTGTGACAACACCTGCTGCCCTTCTGAATTATGTTGACCTTGATAGAACCCGCCGCATAGAATTTATGCGTGGTGTGAAATATGTGGTGTTTGATGAAGCTGATATGCTTCTCTGTGGGAGCTTCCAGAATAAAGTAATCCGCCTGATAAACTTGCTCCGCTTCGATGAAAAACTCTTGTCTCGATCAAAAAAATCAGCAGCAGAGTTTCCAATGAAACAGGAATCTTCCTTGTCATCCGAAGATGCTTTTGAAGGTGAAGAGGACCTTCAAATTGAAGCTATTTCAGAAGAGGATGACAATGATAAAGAGGATATTTTTGATATTAATAATGAAGCTGAATCTGTTAAACAAAGAGACTGGAGGAGAGTGAGGAAAAATTATGAGCGTAGTAAACAGTATATTTTTGTTGCTGCTACACTCCCAGTGAATGGAAAGAAAACAGCTGGAGGGATATTAAAATATATGTTTTCTGATGCTGAGTGGGTTTGTGGAAACTACCTTCATCGTCACAATCCAAGATTGGAGCAAAAATGGATAGAAGTTACAGTTGATACTCAAGTGGATGAACTCATAAAGGCTGTGAATCACAGTTTCAGATCCGAAGATTTGGATAATGCTGGTGGCATTCACAGAACAATGGTGTTTGCCAACACTGTTGAGGCTGTTGAAGCTGTGGCAAAGCTATTACTCCGATCTGGGATTGAATGTTCACGTTATCATAAGAATTGCACATTGGAAGAGCGAGCACAAACCTTAGTTGATTTTCATGAGAAAGGTGGTGTTCTTGTATGTACTGATGCTGCTGCTCGTGGTGTTGATATTCCAAATGTTTTACATGTTATTCAGGCAGATTTTGCTACTTCTGCTGTAGACTTTTTGCATAGAGTTGGTCGTACAGCTAGAGCTGGTCAAATTGGACTTGTTACTAGCATGTACACTGAATCCAACAGGGAGCTTGTTGATGCAGTTCGTCGGGCAGAGGAACTTGGTCAACCTGTGGAAACTGCATTTAGCAGGAAAAGAAGCTTCCGCAACAAGCTCAAGAAGAGGGGTAGTAACAAAGTCAGAGAATCAGCAACTATTAGAGTATAG 1737 0.4283 MIVTRSALMLHLQYPPIIRYHFFSHLNYAHTSFVKSTLPSLFKPHSFSRTTPSQTQTRAFVTALASSQGSKARDTFFAEENVSWSSLGLSDTISRALSNIGLTTPSLVQASSVPSVLSGKDVIIAAETGSGKTYSYLVPLIDKLRDNQEHSLYAVSDQEVSSPQKVLLVLCPNVQLCEQVVRMANSLCRDNGETIVSVAAICGRQGWPIREPDVIVTTPAALLNYVDLDRTRRIEFMRGVKYVVFDEADMLLCGSFQNKVIRLINLLRFDEKLLSRSKKSAAEFPMKQESSLSSEDAFEGEEDLQIEAISEEDDNDKEDIFDINNEAESVKQRDWRRVRKNYERSKQYIFVAATLPVNGKKTAGGILKYMFSDAEWVCGNYLHRHNPRLEQKWIEVTVDTQVDELIKAVNHSFRSEDLDNAGGIHRTMVFANTVEAVEAVAKLLLRSGIECSRYHKNCTLEERAQTLVDFHEKGGVLVCTDAAARGVDIPNVLHVIQADFATSAVDFLHRVGRTARAGQIGLVTSMYTESNRELVDAVRRAEELGQPVETAFSRKRSFRNKLKKRGSNKVRESATIRV 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3225g00001 578 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 401 566 IPR001650 -
Mupr3225g00001 578 SMART ultradead3 101 392 IPR014001 -
Mupr3225g00001 578 CDD DEADc 93 274 - -
Mupr3225g00001 578 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 530 IPR027417 -
Mupr3225g00001 578 SMART helicmild6 438 518 IPR001650 -
Mupr3225g00001 578 Gene3D - 389 576 IPR027417 -
Mupr3225g00001 578 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 113 373 IPR014001 -
Mupr3225g00001 578 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 82 110 IPR014014 GO:0003724
Mupr3225g00001 578 Gene3D - 47 371 IPR027417 -
Mupr3225g00001 578 Pfam DEAD/DEAH box helicase 108 272 IPR011545 GO:0003676|GO:0005524
Mupr3225g00001 578 Pfam Helicase conserved C-terminal domain 425 518 IPR001650 -
Mupr3225g00001 578 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 92 554 - -
Mupr3225g00001 578 CDD SF2_C_DEAD 389 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3225g00001 Mupr-Chr3225 1885 8314 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3225g00001 332 551 Eukaryotic Initiation Factors Gene Family AT5G11170 27.155 7.82e-11 62.0