LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr3217g00002	ATGGCTGATTATTCAGTTGAATCTGAATCCCGTGAGGTAGTTGTAAATGTAACCAAGGACCCCTCCAAAACAATTGAACGCTCAGACTCCTTGGTCTCTGTTCCTTTCTTGCAGAAGTTGGTAGCTGAGGTAGTGGGCACGTATTTCTTGATATTTGCAGGGTGTGCCTCAGTGGTGGTGAACAAGAACAACGAGAACGTGGTAACACTTCCTGGGATAGCTATTGTTTGGGGGCTGGTTGTGATGGTGCTGGTTTACTCTGTTGGTCACATCTCTGGTGCCCATTTCAATCCTGCTGTCACCATTGCTTTTGCCTCCGTCAGAAGGTTTCCCTTGACGCAGGTACCAGCTTATGTAGCAGCTCAGCTCCTAGGAAGCACACTTGCAAGTGGAACTCTGAAACTACTATTTATGGGCAGGCATGACCAGTTTTCAGGAACAATCCCAGCTGGGACGGACCTGCAAGCTTTTGTGTTTGAATTCATAATCACTTTTTTCCTCATGTTTGTCATATCCGGGGTTGCCACCGATAACAGAGCGGTTAATTCAACCCGTTCTGCTTTTAAACCACCAAACATTTTTCTAAAGGTTTCAGACCGATTTGAC	606	0.4604	MADYSVESESREVVVNVTKDPSKTIERSDSLVSVPFLQKLVAEVVGTYFLIFAGCASVVVNKNNENVVTLPGIAIVWGLVVMVLVYSVGHISGAHFNPAVTIAFASVRRFPLTQVPAYVAAQLLGSTLASGTLKLLFMGRHDQFSGTIPAGTDLQAFVFEFIITFFLMFVISGVATDNRAVNSTRSAFKPPNIFLKVSDRFD	202

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr3217g00002	202	SUPERFAMILY	Aquaporin-like	31	182	IPR023271	-
	Mupr3217g00002	202	Gene3D	Glycerol uptake facilitator protein.	2	198	IPR023271	-
	Mupr3217g00002	202	Pfam	Major intrinsic protein	31	196	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mupr3217g00002	202	ProSitePatterns	MIP family signature.	95	103	IPR022357	-
	Mupr3217g00002	202	PRINTS	Major intrinsic protein family signature	38	57	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mupr3217g00002	202	PRINTS	Major intrinsic protein family signature	77	101	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mupr3217g00002	202	PRINTS	Major intrinsic protein family signature	114	133	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mupr3217g00002	202	PRINTS	Major intrinsic protein family signature	159	177	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mupr3217g00002	202	PANTHER	AQUAPORIN NIP2-1	22	183	IPR034294	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr3217g00002	Mupr-Chr3217	17913	19305	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr3217g00002	7	183	Major Intrinsic Protein MIP	AT4G18910	63.077	1.05e-82	243

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr3217g00002	K09874		-	gmx:100813448	304.679