Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3208g00004 ATGTACGGTCGCGACGGAATATATCGGTCTCTAAGGCCTTCCTTGGTTCTCCCAACGGACCCCAACCTCTCCCTCGTCTCATTCCTCTTCCAAAGAGTTTCCTCTTTCCCCAACAAAACCGCCCTCATCGACGCCGACTCTTCCCAAACCCTCTCCTTCGCCCAGCTCAAATCTCAAGTCGCCAGGCTTGCCAGCGGTTTCCTCCACCTCGGCGTAACCAAAAACGACGTCGTTCTCTTGTTCTCTCCCAACACCATCCACTTCCCGATATGCTTCCTCGCCGCCACCGCAATCGGCGCCGTCGTCTCCACTGCCAATCCCTCTTACACCGTCGCGGAACTCTCCAAGCAGGTCAACGATTCCAACCCCAAGCTCGTCATCACCGTCCCCGAACTAATGGACAAAGCGAAGAGCCTCGGCCTGAGAATCACTAGCTTCGAGGCGGCAATGGAGACGGCGGAGCCAGCGACGGAGCTTCCGGAGAGCGGCGTAAAGCAGGGCGACACGGCGGCGCTTCTGTACTCCTCGGGGACCACGGGCGTGAGCAAGGGCGTGGTCCTCACGCACCGGAACTTCATCGCGGCGGCGGTGATGATAGGCATGGACGACGAGCTGGCCGGGGACGTAAACGACGTGTTCCTCTGCGTTTTGCCGATGTTTCACGTGTTCGGGCTGGCGGTCGTGACGTACGCAGCGCTTCAGCGAGGGAGCGCGGTGGTGATAATGAGGAAGTTCGAGTTGGAGGAGTTACTGAAGGCGATTGTGAAGCATAGGGTGACGAAGCTGTGGGTGGTACCTCCGATCTTGCTTGCTCTGGCCAAACAGAGCGTGGTTGAGAAGTATGATCTTTCGTCGTTGAGGCGAATTGGTTCGGGTGCTGCTCCTCTCGGGAAAGATTTGATGGAAGACTGTGCCAGGCGTTTTCCTCATGTTGCCATTTGTCAGGGCTATGGTATGACAGAAACTTGTGGCATTGTTTCTATGGAGAATCCAAGAGAAGGGATTCGTCATACTGGCTCAACGGGAACACTGGCTTCGGGAGTTGAAGCTCAAATAGTGAGTGTGGATACACAGAACCCGCTCCCTCCTAGACAGGTGGGGGAGATATGGGTGCGGGGTCCTAACATGATGCAAGGTTATCACAACAATCCGGAGGCCACAAGATTGACAATAGATAAAAAGGGGTGGGTACATACAGGAGATCTTGGATATTTTGATGAAAATGGTCAACTTTATGTGGTTGACCGTATCAAAGAACTGATCAAGTACAAAGGTTTTCAGGTTGCACCAGCAGAACTTGAAGGTCTTCTCGTTTCTCACCCTGATATACTGGATGCTGTTGTTGTCCCATATCCCGATGATGAGGCTGGTGAGGTTCCAATTGCCTATGTTGTTCGTTCACCCAATAGTTCACTCACTGAAGAAGAAGTTCAGAAGTTTATTGCTAAGCAGGTTGCACCTTTCAAAAAATTGCGAAGGGTGACATTCATCAGCAGTGTTCCTAAGACAGCTTCAGGAAAAATTCTCAGAAGAGAGCTTACTGCGAAAGCACGATCCAAAATATAA 1566 0.5243 MYGRDGIYRSLRPSLVLPTDPNLSLVSFLFQRVSSFPNKTALIDADSSQTLSFAQLKSQVARLASGFLHLGVTKNDVVLLFSPNTIHFPICFLAATAIGAVVSTANPSYTVAELSKQVNDSNPKLVITVPELMDKAKSLGLRITSFEAAMETAEPATELPESGVKQGDTAALLYSSGTTGVSKGVVLTHRNFIAAAVMIGMDDELAGDVNDVFLCVLPMFHVFGLAVVTYAALQRGSAVVIMRKFELEELLKAIVKHRVTKLWVVPPILLALAKQSVVEKYDLSSLRRIGSGAAPLGKDLMEDCARRFPHVAICQGYGMTETCGIVSMENPREGIRHTGSTGTLASGVEAQIVSVDTQNPLPPRQVGEIWVRGPNMMQGYHNNPEATRLTIDKKGWVHTGDLGYFDENGQLYVVDRIKELIKYKGFQVAPAELEGLLVSHPDILDAVVVPYPDDEAGEVPIAYVVRSPNSSLTEEEVQKFIAKQVAPFKKLRRVTFISSVPKTASGKILRRELTAKARSKI 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3208g00004 521 Gene3D - 419 520 IPR045851 -
Mupr3208g00004 521 Gene3D - 6 418 IPR042099 -
Mupr3208g00004 521 SUPERFAMILY Acetyl-CoA synthetase-like 19 519 - -
Mupr3208g00004 521 Pfam AMP-binding enzyme 30 423 IPR000873 -
Mupr3208g00004 521 FunFam Long-chain-fatty-acid--CoA ligase FadD 9 418 - -
Mupr3208g00004 521 Pfam AMP-binding enzyme C-terminal domain 432 507 IPR025110 -
Mupr3208g00004 521 CDD 4CL 17 513 - -
Mupr3208g00004 521 FunFam 4-coumarate--CoA ligase 2 419 520 - -
Mupr3208g00004 521 ProSitePatterns Putative AMP-binding domain signature. 172 183 IPR020845 -
Mupr3208g00004 521 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3208g00004 Mupr-Chr3208 29650 35704 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3208g00004 2 521 Monolignol Biosynthesis Gene Families AT4G05160 68.089 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3208g00004 K01904 - gmx:100808944 880.167