Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3202g00013 ATGTCTCGCACGTGCTCACAGTGCGGCAACAACGGCCACAACTCGCGGACATGCACCGATGGTGGCGCCGCCGCCTCCGGAGGCGGGTCTCCGAGGGAGAACGGCATCATGCTGTTCGGCGTGCGAGTCACGGCTGAAGGGAACTCCTCCTTCAGGAAGAGCGCTAGCATGAACAACCTCTCCCAGTACGACCCGGATTCCAACGCCGCCGACGCCGGCTACGCCTCCGACGACGTCGTTCACGCCTCCGGTCGCACACGCGAGCGCAAGCGAGTGTTTGGATTGGTGAACGAAGGTGTTCCTTGGACGGAGGAAGAGCATAGGTTATTCCTCTTGGGGTTACACAAAGTCGGCAAAGGAGATTGGAGAGGAATTTCTAGAAACTTCGTGAAAACTCGCACACCAACTCAGGTCGCAAGTCATGCTCAGAAGTACTTCCTCCGCCGCCACAACCAGAACCGCCGCCGCCGGAGATCTAGCCTTTTCGACATCACCACTGATACGGTGATGGAATCTTCTACTATAATGGAAGAAGAACAAGTTCAGCACGAAACAGTGGCAGCGCCTATCCCCGCCGCATATCCGCCGTCGCATTACGGTGGCTTTCCCGGCGCGGGTTTCCCGATGAGTTTGTCTCCGGTGGCGTTACCGGTGAGTGGTGAGAGACTAGCCAAGCCGATCAGGCCGACGCCGATTTTGCCGGTGCCTCCGTCTTCGAAGATGGCTAATTTGAACCTGAAAGAGAAAGCTTCTCCAATTAATCTCATTGAGCCTTTACCGTTGTCGTTGAATCTGCCGCCGCCGCTGCCGCCGTCCTCGCCGTCTCAGGATCAGTCGCCGGCAAGTAGTGGCCACTCTTCGCCGTTGTCGTCGTCATCGGCGGCAGCCGCTTTTCAGGCTATGTCTGCAAGGAAGTTCGGCGGTGGTGGGGATAGTATTATCAGTGTTGCTTGA 954 0.5744 MSRTCSQCGNNGHNSRTCTDGGAAASGGGSPRENGIMLFGVRVTAEGNSSFRKSASMNNLSQYDPDSNAADAGYASDDVVHASGRTRERKRVFGLVNEGVPWTEEEHRLFLLGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMESSTIMEEEQVQHETVAAPIPAAYPPSHYGGFPGAGFPMSLSPVALPVSGERLAKPIRPTPILPVPPSSKMANLNLKEKASPINLIEPLPLSLNLPPPLPPSSPSQDQSPASSGHSSPLSSSSAAAAFQAMSARKFGGGGDSIISVA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3202g00013 317 SUPERFAMILY Homeodomain-like 98 149 IPR009057 -
Mupr3202g00013 317 CDD SANT 101 146 IPR001005 -
Mupr3202g00013 317 ProSiteProfiles SANT domain profile. 97 150 IPR017884 -
Mupr3202g00013 317 MobiDBLite consensus disorder prediction 264 294 - -
Mupr3202g00013 317 NCBIfam myb-like DNA-binding domain, SHAQKYF class 98 148 IPR006447 GO:0003677
Mupr3202g00013 317 ProSiteProfiles Zinc finger CCHC-type profile. 5 20 IPR001878 GO:0003676|GO:0008270
Mupr3202g00013 317 SMART sant 98 148 IPR001005 -
Mupr3202g00013 317 MobiDBLite consensus disorder prediction 276 294 - -
Mupr3202g00013 317 PANTHER TRANSCRIPTION FACTOR KUA1 1 250 - -
Mupr3202g00013 317 Pfam Myb-like DNA-binding domain 101 146 IPR001005 -
Mupr3202g00013 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 150 IPR017930 -
Mupr3202g00013 317 MobiDBLite consensus disorder prediction 1 21 - -
Mupr3202g00013 317 MobiDBLite consensus disorder prediction 1 31 - -
Mupr3202g00013 317 ProSiteProfiles Myb-like domain profile. 101 146 IPR001005 -
Mupr3202g00013 317 FunFam transcription factor MYB1R1 100 151 - -
Mupr3202g00013 317 Gene3D - 100 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3202g00013 Mupr-Chr3202 110597 111838 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr3202g00013 Myb_DNA-binding 3.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3202g00013 - - gmx:778178 429.483