Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3198g00004 AATATTGGTTTGGTGGTTGCTTCGTTTATTATTGCCTTCATCTTGAACTGGAGAATAACACTTGTTGTCATAGCCACATATCCTTTGGTCATTAGTGGTCATATCAGTGAGAAACTTTTTATGAAAGGCTATGGTGGAAACTTGAGCAAAGCATATCTAAAAGCAAACATGCTGGCTGGGGAGGCTGTGAGCAATATACGCACTGTTGCCGCATTTTGCTCTGAAGAAAAGATCCTTGACCTTTATGCTAACGAGCTTGTTGATCCCTCCAAACGCTCTTTTCAACGAGGCCAAATTGCTGGCATATTCTATGGCATTTCCCAGTTCTTTATTTTCTCATCCTATGGCCTTGCCTTGTATGGATCTGTTTTGATGGAAAAGGAGCTTGCTAGCTTTAAATCAATTATGAAGGCATTTATGGTTTTGATAGTAACAGCACTGGCTATGGGGGAAACTTTGGCCCTGGCCCCAGACCTTTTGAAAGGGAATCAAATGGTTTCATCTGTTTTTGAAGTGATGGATAGAAAGTCAGGAATATCGGGTGATGTTGGAGAAGAGTTGAAGACAGTGGAGGGAACTATTGAGCTCAAAAGAATCAATTTCAGCTACCCCTCAAGGCCAGATGTTATTATTTTCAAGGATTTCAATCTAAGAGTTCCTGCAGGCAAGAGTATTGCTTTAGTGGGGCAAAGTGGTTCTGGTAAAAGCTCTGTGATCTCCCTTATACTCAGGTTTTATGATCCAACATCTGGGAGGGTGTTAATTGATGGAAAAGACATCACAAAACTGAATCTGAAATCTCTCAGGAAACACATTGGCCTTGTGCAACAAGAACCGGCTCTATTTGCAACATCAATTTATGAAAATATACTTTATGGCAAGGAAGGTGCCTCTGACTCAGAAGTGATTGAAGCAGCTAAGCTTGCCAATGCTCATACCTTTATCAGTGGTCTTCCTGAGGGTTACTCCACCAAAGTAGGTGAACGAGGAGTGCAGCTATCTGGTGGCCAGAGACAAAGGGTGGCCATTGCAAGAGCAGTTTTAAAGAACCCTGAAATCTTGCTATTGGATGAAGCCACTAGTGCACTTGATGTGGAGTCAGAGCGTGTGGTGCAGCAGGCATTGGACAGATTAATGCAAAACAGAACAACAGTTATTGTGGCACATAGGCTTTCCACTATAAGAAATGCAGACCAAATCTCAGTTTTACAGGATGGGAAGATAATTGAGCAAGGGACTCATTCAAGTCTTATAGAGAATACAAATGGAGCATACTTTAAATTAATCAACCTTCAACAACAACAGCATCAACTATAG 1317 0.4146 NIGLVVASFIIAFILNWRITLVVIATYPLVISGHISEKLFMKGYGGNLSKAYLKANMLAGEAVSNIRTVAAFCSEEKILDLYANELVDPSKRSFQRGQIAGIFYGISQFFIFSSYGLALYGSVLMEKELASFKSIMKAFMVLIVTALAMGETLALAPDLLKGNQMVSSVFEVMDRKSGISGDVGEELKTVEGTIELKRINFSYPSRPDVIIFKDFNLRVPAGKSIALVGQSGSGKSSVISLILRFYDPTSGRVLIDGKDITKLNLKSLRKHIGLVQQEPALFATSIYENILYGKEGASDSEVIEAAKLANAHTFISGLPEGYSTKVGERGVQLSGGQRQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMQNRTTVIVAHRLSTIRNADQISVLQDGKIIEQGTHSSLIENTNGAYFKLINLQQQQHQL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3198g00004 438 Gene3D ABC transporter type 1, transmembrane domain 4 435 IPR036640 GO:0005524|GO:0016020
Mupr3198g00004 438 FunFam ABC transporter B family member 4 184 437 - -
Mupr3198g00004 438 CDD ABC_6TM_Pgp_ABCB1_D2_like 1 179 - -
Mupr3198g00004 438 Pfam ABC transporter 213 361 IPR003439 GO:0005524
Mupr3198g00004 438 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 161 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr3198g00004 438 SMART AAA_5 221 413 IPR003593 GO:0016887
Mupr3198g00004 438 SUPERFAMILY ABC transporter transmembrane region 3 175 IPR036640 GO:0005524|GO:0016020
Mupr3198g00004 438 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 49 188 - -
Mupr3198g00004 438 Pfam ABC transporter transmembrane region 3 147 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr3198g00004 438 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 2 428 IPR039421 -
Mupr3198g00004 438 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 194 430 IPR003439 GO:0005524
Mupr3198g00004 438 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 432 IPR027417 -
Mupr3198g00004 438 CDD ABC_MTABC3_MDL1_MDL2 194 432 - -
Mupr3198g00004 438 Gene3D - 184 433 IPR027417 -
Mupr3198g00004 438 ProSitePatterns ABC transporters family signature. 333 347 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3198g00004 Mupr-Chr3198 27073 29046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3198g00004 6 437 Calmodulin-binding Proteins AT2G36910 48.402 4.75e-123 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3198g00004 K05658 - gmx:100819045 805.438