Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3198g00001 ATGCACCACCCAAAACTTGATTTCCAATGGTTTCCTCTTCATTTTCCAAGTTATTTTCTTTATATGGGTACAGTAGGAGCCAATATGTCAGACCGGGGTACCTTCTCCGGCGACTCGGCCGTGGATGCAAAGACCAAAAAGGAGCACAAAGTTCCTTTGTTGAAACTCTTCTCTTTTGCTGACTTTTATGACTGTGTCTTAATGGCCCTTGGATCTGTTGGGGCATGTATTCATGGTGCTTCTGTTCCTGTTTTCTTTATCTTCTTTGGAAAGTTGATCAATGTCATAGGCTTGGCCTATCTTTTCCCCAAGGAAGCCTCTCACAAAGTTGCCAAGTACTCGTTGGATTTTGTTTATCTAAGTATAGCAATATTGTTTTCATCCTGGACAGAGGTAGCTTGTTGGATGCATACTGGGGAACGTCAAGCTGCAAAGATGAGAATGGCTTATTTAAAGTCGATGCTGAATCAAGATATAGGCCTATTTGATACCGAGGCATCAACAGGAGAGGTCATTTCTGCCATTACCAGTGACATTATCATTGTTCAGGATGCACTATCCGAGAAGTGCCTTCCCCATGTTCTTCGGCTTCTCCGAAGCAGGAAAAAATAA 612 0.4265 MHHPKLDFQWFPLHFPSYFLYMGTVGANMSDRGTFSGDSAVDAKTKKEHKVPLLKLFSFADFYDCVLMALGSVGACIHGASVPVFFIFFGKLINVIGLAYLFPKEASHKVAKYSLDFVYLSIAILFSSWTEVACWMHTGERQAAKMRMAYLKSMLNQDIGLFDTEASTGEVISAITSDIIIVQDALSEKCLPHVLRLLRSRKK 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3198g00001 203 PANTHER ABC TRANSPORTER B FAMILY 39 190 IPR039421 -
Mupr3198g00001 203 SUPERFAMILY ABC transporter transmembrane region 55 192 IPR036640 GO:0005524|GO:0016020
Mupr3198g00001 203 Gene3D ABC transporter type 1, transmembrane domain 46 198 IPR036640 GO:0005524|GO:0016020
Mupr3198g00001 203 Pfam ABC transporter transmembrane region 71 191 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr3198g00001 203 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 69 188 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3198g00001 Mupr-Chr3198 2164 3874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3198g00001 42 189 Calmodulin-binding Proteins AT2G36910 47.297 2.04e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3198g00001 K05658 - gmx:100810688 289.271