Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3190g00002 ATGACGCAAGCTCATACGCACACCAAGGCAAACCGCGTGCTTCCGAAGGGTATAAAAGGGAGCACCACCCTCCGCTCTTCTCCACTTTCAATTTTTCATCAAATCCAAAAGCACCATGGGAAGAAGTGTTACCGTCAGATAAAGAACAAGCCGTATCCGAAGTCGCGGTTCTGCCGCGGTGTGCCGGACCCGAAGATTCGCATCTACGACGTGGGGATGAAGAAGAAGGGCGTGGAGGAGTTCCCGTTTTGCGTGCACCTGGTGTCATGGGAAAAGGAGAATGTGTCGAGTGAGGCTCTGGAGGCGGCGCGTATAGCCTGCAACAAGTACATGGCAAGGTTCGCCGGGAAGGACGCCTTCCACCTCCGCGTGAGGGTCCATCCCTTCCACGTCCTCCGCATCAACAAGATGCTATCGTGCGCCGGGGCCGATAGGCTCCAGACCGGCATGAGGGGCGCGTTCGGGAAGCCTCAGGGGACGTGCGCCAGGGTCAGCATCGGGCAGGTGCTTCTCTCCGTGCGGTGTAAGGATGCTAACAGCCACCACGCTCAGGAGGCTCTTCGCCGTGCCAAGTTCAAGTTCCCTGGTCGCCAGAAGATCATTGTTAGCAGAAAATGGGGATTTACAAAGTTGAGTCGAAGTGAGTATTTGAAGCTGAAGTCTGAGAACAGAATTGTGCCGAATGGGGTCAATGCCAAGGTTCTTGGGTGTCACGGACCTTTGGCAAATCGTGAGCCTGGAAGAGCTTTCTTACCAGCTACTGCCATTTAG 771 0.5525 MTQAHTHTKANRVLPKGIKGSTTLRSSPLSIFHQIQKHHGKKCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVEEFPFCVHLVSWEKENVSSEALEAARIACNKYMARFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVSIGQVLLSVRCKDANSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKLSRSEYLKLKSENRIVPNGVNAKVLGCHGPLANREPGRAFLPATAI 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3190g00002 256 SUPERFAMILY Ribosomal protein L16p/L10e 42 208 IPR036920 GO:0003735|GO:0005840|GO:0006412
Mupr3190g00002 256 PANTHER 60S RIBOSOMAL PROTEIN L10 41 248 IPR001197 GO:0003735|GO:0005840|GO:0006412
Mupr3190g00002 256 Pfam Ribosomal protein L16p/L10e 47 201 IPR016180 GO:0003735|GO:0005840|GO:0006412
Mupr3190g00002 256 Gene3D Ribosomal protein L10e/L16 38 250 IPR036920 GO:0003735|GO:0005840|GO:0006412
Mupr3190g00002 256 ProSitePatterns Ribosomal protein L10e signature. 143 164 IPR018255 GO:0003735|GO:0005840|GO:0006412
Mupr3190g00002 256 NCBIfam 50S ribosomal protein L16 40 209 IPR001197 GO:0003735|GO:0005840|GO:0006412
Mupr3190g00002 256 FunFam 60S ribosomal protein L10 37 241 - -
Mupr3190g00002 256 CDD Ribosomal_L16_L10e 76 201 IPR016180 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3190g00002 Mupr-Chr3190 9299 11111 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3190g00002 42 255 Cytoplasmic Ribosomal Protein Gene Family AT1G66580 84.579 3.23e-137 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3190g00002 K02866 - gmx:100779884 432.18