Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3189g00002 ATGGACACCTCTTACCACCACTTGGACCACACTGAAGCTCACTTGCCACCTGGTTTTCGCTTCCACCCCACAGACGAGGAGCTCATAACGTACTACCTTCTCAAGAAGGTTATGGACAGCACCTTCACTGGAAGAGCCATAGCTGAAGTTGACCTTAACAAGAGTGAGCCATGGGAGCTTCCTGAAAAAGCTAAGATGGGTGAGAAGGAGTGGTACTTCTTCAGCTTACGTGATAGGAAGTACCCAACTGGGTTAAGAACCAATAGGGCCACTGAAGCTGGTTACTGGAAAGCCACTGGGAAAGATAGAGAGATTTATAGCTCCAAAACTTGTTCTTTGGTGGGGATGAAGAAAACCTTGGTTTTTTACCGAGGTAGAGCTCCAAAGGGGGAGAAAAGCAACTGGGTCATGCATGAGTATCGCCTTGAAGGCAAATTTGCTTACCATTACCTTTCTCGCAACTCCAAGGACGAGTGGGTGATATCGCGTGTGTTCCAGAAGAGCAACACGAGCAACGGAGGGTCCACCATGTCTGCCACAAGCGGCTCCAAGAAGACAAGAATGAACACAACCACGACCACCACCTCTCTCTGCGCCGAACCAAGTTCACCCTCCTCCGTTTACCTTCCACCGCTTCTCGACTCTTCTCCGTACACCGCCACGGCAAGCTTCAACGACCGTCACAACTGTTCCTATGACAGCACCATCAAAAGGGAGCACGTGTCCTGTTTCTCCACAATAGCTGCAGCCACCGCTGCTGCTGTCTCCACCACCAACAACAGCAACAACTTCGCCAATGCAACAACAAGCTTCGACCTCCCTCCTTCTCAGCCTCTTGCAACAGACCCTTTTGCTCGCTTCCAGAGAAACGTTGGCGTCTCTGCCTTCCCGAGTTTGAGGTCGCTGCAAGACAACCTTCAGCTGCCGTTCTTTTTCTCCCCGGCGGCGCAGCCCTTCTCCAGCGACTTTCTCGGCTGGCCAATGCCGGAGGAGCAGAAGCTCGTTGAAGGTGGCTCCAACATGGCACTGGAGTCGTCGGAGCTTGATTGCATGTGG 1056 0.5227 MDTSYHHLDHTEAHLPPGFRFHPTDEELITYYLLKKVMDSTFTGRAIAEVDLNKSEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRNSKDEWVISRVFQKSNTSNGGSTMSATSGSKKTRMNTTTTTTSLCAEPSSPSSVYLPPLLDSSPYTATASFNDRHNCSYDSTIKREHVSCFSTIAAATAAAVSTTNNSNNFANATTSFDLPPSQPLATDPFARFQRNVGVSAFPSLRSLQDNLQLPFFFSPAAQPFSSDFLGWPMPEEQKLVEGGSNMALESSELDCMW 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3189g00002 352 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Mupr3189g00002 352 SUPERFAMILY NAC domain 11 167 IPR036093 GO:0003677|GO:0006355
Mupr3189g00002 352 Gene3D NAC domain 24 172 IPR036093 GO:0003677|GO:0006355
Mupr3189g00002 352 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 234 - -
Mupr3189g00002 352 ProSiteProfiles NAC domain profile. 15 167 IPR003441 GO:0003677|GO:0006355
Mupr3189g00002 352 FunFam NAC domain-containing protein 100-like 24 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3189g00002 Mupr-Chr3189 25334 27075 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3189g00002 1 311 NAC Transcription Factor Family AT5G53950 56.287 2.40e-118 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr3189g00002 NAM 1.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3189g00002 - - vun:114185732 573.548