Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3177g00002 ATGGCGAACGCAGCTGAAGTCTCAGCCCTGAAGCGCATCAAATTGCATCTTCTAGGAGAACTCTCTCCGCTGGGAACTCCCCAAAATAAACAACAACCATGGTTCGAATTTGACGAAGCAAACCCTAGTCCCTCTCAATCTTCCACTTCTGACTCTGGTATTTCGTTGAACCACTACTTCACTGACCTCCTCCAACCCGAAACCCAATTTCCCCTCTTCGAATTCGACTCCAGACCCCAAATAATTAACCTCGAAACCCCGAAACCCCTTAAATCGGAAACCGTTCAGAAGAAAGGTCAACTAAATCGGAAACCCTCGCTGCAAATCTCTCTCCCTAATAAAACCGAGTGGATCCGGTTCGGGAACCCGGATCCGAACCCGGAGGTGGAGGTGGTCCCGCCGGAGAACCAACCGGAGAAGAAGCACTACAGAGGGGTCCGGCAGAGACCGTGGGGGAAATTCGCCGCTGAGATCCGCGACCCGAACAAGCGCGGCTCAAGGGTGTGGCTCGGAACCTTCGACACCGCCATCGAAGCCGCCAAGGCCTATGACCGCGCTGCCTTCAAACTCCGCGGCTCCAAGGCCATCCTCAACTTCCCCCTCGAAGTTAACACAGAATCGGCCGGTGGCGGCGAGAAGAAGCGCCTTCGCGAGGAGGAAGTGGTGGAGGAGGAAGTGAAGGCGGCGGTGAAGAAGGAGAGAACGACGGAACCGGACGTGAATTGTTTTAGAGAGATGCCGTTAACGCCGTCTATTTGGAATGGGTTCTGGGACACTGAGGTTAAGGAGATTTTCAACGTTCCACCGCTGTCCCCGTTATCTCCTCTTCCCCCTTTTGGATTTTCACCGCTCATGGTTGTGTGA 864 0.5417 MANAAEVSALKRIKLHLLGELSPLGTPQNKQQPWFEFDEANPSPSQSSTSDSGISLNHYFTDLLQPETQFPLFEFDSRPQIINLETPKPLKSETVQKKGQLNRKPSLQISLPNKTEWIRFGNPDPNPEVEVVPPENQPEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLEVNTESAGGGEKKRLREEEVVEEEVKAAVKKERTTEPDVNCFREMPLTPSIWNGFWDTEVKEIFNVPPLSPLSPLPPFGFSPLMVV 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3177g00002 287 SUPERFAMILY DNA-binding domain 142 202 IPR016177 GO:0003677
Mupr3177g00002 287 MobiDBLite consensus disorder prediction 24 53 - -
Mupr3177g00002 287 PRINTS Ethylene responsive element binding protein signature 182 202 IPR001471 GO:0003700|GO:0006355
Mupr3177g00002 287 PRINTS Ethylene responsive element binding protein signature 143 154 IPR001471 GO:0003700|GO:0006355
Mupr3177g00002 287 Gene3D AP2/ERF domain 141 202 IPR036955 GO:0003700|GO:0006355
Mupr3177g00002 287 PANTHER DNA-BINDING DOMAIN 105 218 IPR044808 GO:0003700|GO:0009873
Mupr3177g00002 287 MobiDBLite consensus disorder prediction 22 53 - -
Mupr3177g00002 287 FunFam Ethylene-responsive transcription factor 2 141 202 - -
Mupr3177g00002 287 CDD AP2 141 200 IPR001471 GO:0003700|GO:0006355
Mupr3177g00002 287 ProSiteProfiles AP2/ERF domain profile. 142 200 IPR001471 GO:0003700|GO:0006355
Mupr3177g00002 287 SMART rav1_2 142 206 IPR001471 GO:0003700|GO:0006355
Mupr3177g00002 287 MobiDBLite consensus disorder prediction 122 146 - -
Mupr3177g00002 287 Pfam AP2 domain 142 192 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3177g00002 Mupr-Chr3177 28513 29376 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3177g00002 1 287 AP2-EREBP Transcription Factor Family AT5G47230 44.654 1.68e-67 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr3177g00002 AP2 3.4e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3177g00002 K09286 - gmx:100800453 370.933