Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3168g00002 ATGAAACTGTGCGTTTTTGCTTTCAGGAAGAGGAGAAGAATAGGAAGCTGGTGTGGCTCTCTCCTCTTCCTTCCTCTTTCTTCTTCCTTCTTTCATCTTCCAATTAGGGTTTTGGGTTTTCTTCCAAACCTCTTCTTCCTTCTTCTTTGCACCGCACCCAATCCAACCCATTTTTCGACCCGGTACGAGGTGTCGTTGCCATTGGTAATGGAATTGAATGGAATGGGAGTTTGCTTGGCAGAAAATGTTGGAATTTTGTTACTGCAAACTTATTGTGGGTTTGAAAACATTTATCTTTTTGAGATTGTGTTTTGGAGCACCATATTTTCCACCAATCTGGACCAGATTTTACCGAGTCAGTTGCTCATCCGATCTAACAAGTTTGCTCAGACTGGTTATATGTCCGGCTCCCGGTCCGAGTTGGGAATAAAAAGACTTCAGATTCTGAAGATGGCTGCAACCTTTGCTTCCAGATGTTCTCGTGTATCATCTGTAGCACTGAGAGGATTCCTGATCCTCCTGTTATGTACTTTAACTATTGCAACTTTGCAAGATGATTTTGTTGTTCAAAAACATCAACAACGCACCTTCATACAGATGAGGACTGTTCTCAAGGTTGTGGATAACTCGGGCGCCAAAAAGGTGATGTGCATACAGGCATTGAAAGGGAAGAAAGGGGCAAGATTAGGTGACACAATAATAGCATCTGTGAAGGAAGCACATCCTAATGGAAAAGTGAAGAAAGGAAAGGTTGTATATGGGGTGGTTGTGCGTGCAGCAATGCAAAAGGGGCGTTGTGATGGCAGTGAGGTCAAGTTTGATGATAATGCTGTGGTGCTTGTTGACAAGCAAGGCCAGCCTATTGGAACTAGAGTTTTTGGACCAGTGCCTCATGAGCTCAGGCAAAAGAAGCATGTCAAGATTCTTACCTTGGCAGGGCACATTGCATAA 951 0.4353 MKLCVFAFRKRRRIGSWCGSLLFLPLSSSFFHLPIRVLGFLPNLFFLLLCTAPNPTHFSTRYEVSLPLVMELNGMGVCLAENVGILLLQTYCGFENIYLFEIVFWSTIFSTNLDQILPSQLLIRSNKFAQTGYMSGSRSELGIKRLQILKMAATFASRCSRVSSVALRGFLILLLCTLTIATLQDDFVVQKHQQRTFIQMRTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3168g00002 316 SMART Ribosomal_L14_2 197 316 IPR000218 GO:0003735|GO:0005840|GO:0006412
Mupr3168g00002 316 ProSitePatterns Ribosomal protein L14 signature. 254 280 IPR019972 -
Mupr3168g00002 316 Hamap 50S ribosomal protein L14 [rplN]. 197 316 IPR000218 GO:0003735|GO:0005840|GO:0006412
Mupr3168g00002 316 Gene3D Ribosomal protein L14 197 316 IPR036853 GO:0003735|GO:0005840|GO:0006412
Mupr3168g00002 316 FunFam 50S ribosomal protein HLP, mitochondrial-like 197 316 - -
Mupr3168g00002 316 NCBIfam 50S ribosomal protein L14 198 315 IPR005745 GO:0003735|GO:0006412|GO:0015934
Mupr3168g00002 316 SUPERFAMILY Ribosomal protein L14 198 315 IPR036853 GO:0003735|GO:0005840|GO:0006412
Mupr3168g00002 316 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 198 315 IPR000218 GO:0003735|GO:0005840|GO:0006412
Mupr3168g00002 316 Pfam Ribosomal protein L14p/L23e 198 315 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3168g00002 Mupr-Chr3168 18314 22924 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3168g00002 208 299 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 33.673 1.57e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3168g00002 K02874 - gmx:100818301 241.121