Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3165g00013 ATGCATCAAAACCAAAAATCTGAAAGGAAGGAGAAGTATAATGCGATAAGAAACGTCGTCGTGTGGTTTGGGGCGCGTGTTGACGAGTTTGGCGCAGTCGCCGGCAGAGGATTTGATAGAAAGAAAAGGTTGGGTCTAAGACTCTTTCATTCTTGGTTTCTTCTTCTTCTTTCGAAATCGAAATCAAAATCCAACTTCCTCACTTCAAATTTCACATTATTTCCTGCTTTCTTCGGAGATCCCACTCTCCGCTTCTCTCAGATGGCTGCAAATTCTGGGAATATCTCATTTACATCGTCTTGGTCTACTACTTCACAGATTCATGGGGATACTGATTCTGTCCAGGCCCTATCACCTGATAATGAGATGGCTAGCGATCTTGCTAGCAGCAGTGTGTGTGACTCTGGGAGTCATACGCAAAGCTTGCGAAGGAGGTTTAGAGGAAGATTCAGGCACAACAGTTCTGAATCCGTTGAGAATAATTTATCCCAACAGATCCCCCATATGGTTAATACTGTGAGGCGACATCAGTCCCCTGCATTTGGGGAGGATGACCAACTTGTAGATGGTGACAACCCTGCTTGGTCATTGCAATATGCTAGTACACATACTACCCCTAGTGGGTCTAGAAGGTGGAGGCAGGTTCTCTCTGACACTGACAGTGATGGTTTTGATAATTGGGCTTCTCTTTATGGTGAAAATGAATCAAGTGTGAGTTTTAGACGGTACAGGGTTCCCCATGTTGAGACTGATTCTTTCTCTCACAGTGCTTATGGAGGTGACTCAGATATCTCTATGGATACACATAGTTTTATAGGCACTGGAATCTTTAATTTACCAGGTGAAGGAGATGATTTTGATAGTGACACTGACATAGATCCAATGAATGCTGGCCTCAGCCAATTGATTACTGATGAAGACAGTGATGAAGATGAAGATGAAGAAGAGGATGAAGAGGAGGAGGAGGAGGAGGATAGGGAATGGGAATTAGCTGAGGCCGAGGCTGAGGAAGGTGAAACCCCAGCCCGCCTTCAAATTTTTTTCACCTCAAGTCCAAGTGAGAGCAGGGACCGCAATAATTGGGAACAAAGGTTTAATTCTACTGAATCTGAGGGAATGTTTAGCCAGCTAATGAGGGATACCTGGCAATCTTTGGAGGATGTTGATTTACCTCATAGAGCAAACTTTGGGGATTATCTTGATGCTAGACGTTTTGAAGATCTGTTTGATCATCTTGCTGAGAATGAAAGCTCAAGACGTGGAGCACCTCCTGCTTCTGTGTCTTTTGTGAATAATCTGCCACGTGTAGTCATTGGCAAGGAACATGAGAAGCATGATGAACTAGTTTGTGCTATTTGCAAGGATGTCTTGGCACCTGGCACTGAAGTAAATCAGCTTCCCTGCGCTCACCTTTATCACATCAATTGCATTTTGCCTTGGCTGAGTGCACGAAATTCATGCCCTCTTTGTCGTTATGAGCTTCCAACCGATGATAAGGATTATGAAGAGGGAAAGCAGAACATTGATCGTAGAAATGTGATCCATGAGAGGCAGCGAGTAGATGTAACAGATGATAGTTCCTCTGATGTTTCTGATGATGATGAGGTGAATGAAGAGGATGGTAGTAGTCAAGGTGGATTTCGGCAGGGAGTTGTGAACTCAGGTTCTACCCAGAATTCTTCTGCAACAAGAAGTGGCAGAGGTAGATGGTTTTTTCTTGCTGCAGCTCCAATTGTTAGTCTAGTGGGCATTGTTCTTGTCTTGTGGTTAGGTAATAACTCTCAGATTGAAGGGAGTAGACATCTGGGTGGTCACTACTTATCCGGGCAAAATCATCACGCAGCTCATGCTTTCTTTCGTTGCAACTGCGAATTTAACTACAGATTCAATTTTCTTTCGGAAGACGTTTCAAACTTCATGAACGCCGAGATGCAGCATTGA 1941 0.4389 MHQNQKSERKEKYNAIRNVVVWFGARVDEFGAVAGRGFDRKKRLGLRLFHSWFLLLLSKSKSKSNFLTSNFTLFPAFFGDPTLRFSQMAANSGNISFTSSWSTTSQIHGDTDSVQALSPDNEMASDLASSSVCDSGSHTQSLRRRFRGRFRHNSSESVENNLSQQIPHMVNTVRRHQSPAFGEDDQLVDGDNPAWSLQYASTHTTPSGSRRWRQVLSDTDSDGFDNWASLYGENESSVSFRRYRVPHVETDSFSHSAYGGDSDISMDTHSFIGTGIFNLPGEGDDFDSDTDIDPMNAGLSQLITDEDSDEDEDEEEDEEEEEEEDREWELAEAEAEEGETPARLQIFFTSSPSESRDRNNWEQRFNSTESEGMFSQLMRDTWQSLEDVDLPHRANFGDYLDARRFEDLFDHLAENESSRRGAPPASVSFVNNLPRVVIGKEHEKHDELVCAICKDVLAPGTEVNQLPCAHLYHINCILPWLSARNSCPLCRYELPTDDKDYEEGKQNIDRRNVIHERQRVDVTDDSSSDVSDDDEVNEEDGSSQGGFRQGVVNSGSTQNSSATRSGRGRWFFLAAAPIVSLVGIVLVLWLGNNSQIEGSRHLGGHYLSGQNHHAAHAFFRCNCEFNYRFNFLSEDVSNFMNAEMQH 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3165g00013 646 MobiDBLite consensus disorder prediction 301 343 - -
Mupr3165g00013 646 SUPERFAMILY RING/U-box 431 497 - -
Mupr3165g00013 646 MobiDBLite consensus disorder prediction 516 564 - -
Mupr3165g00013 646 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 410 497 IPR013083 -
Mupr3165g00013 646 PANTHER SI:CH211-59O9.10 105 496 - -
Mupr3165g00013 646 MobiDBLite consensus disorder prediction 304 335 - -
Mupr3165g00013 646 SMART ring_2 450 490 IPR001841 -
Mupr3165g00013 646 Coils Coil 316 336 - -
Mupr3165g00013 646 ProSiteProfiles Zinc finger RING-type profile. 450 491 IPR001841 -
Mupr3165g00013 646 CDD RING-H2_PA-TM-RING 449 491 - -
Mupr3165g00013 646 MobiDBLite consensus disorder prediction 542 564 - -
Mupr3165g00013 646 Pfam Ring finger domain 450 491 IPR001841 -
Mupr3165g00013 646 FunFam E3 ubiquitin-protein ligase RING1-like isoform A 410 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3165g00013 Mupr-Chr3165 107521 110652 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3165g00013 152 590 C3H Transcription Factor Family AT5G01980 46.222 2.60e-104 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3165g00013 - - gmx:100797923 796.193