Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3165g00011 ATGGAAGGGAACAACGCCGACGTCTTCAGACAATCTTCTTCTCCCGTTGGGGGCTCCTCGTCTTCGCCCAATTCGAGGCGCTATTCCGGGATTCTGTCGGCGTCCAACATCATTCAGGCCCCCTTATCGGTGCTCTTGGAATATTCCGGTATTCTACCATCACGCTCCAACCACCACAGCCCGCCCAGCCCCGACGCCGTCGACAATGATGGCGAGGTTTCGATTAGGATCATCGGCCCGGCGGAGCAGGACCAGCATCCCAGGGAGGACGCGCCGCCCTCTCCCAATGCCGGATTGGTCGTCGGCCTCTCGCATTCCCAGAACGACGCCGTCTTGCCCTCCGCCTCGCCTCGCTCCGACTCCGAGGGCGTCGCGGCGGATGCGTCCCCCGTTGCCGGGGATGGTGCCGGGAGGGATTCCTCTTACCAGAGATACGACATTCAGCACGCTGCCAGGTGGATTGAGCAGGTGCTGCCGTTCTCCTTGCTGCTTTTGGTGGTCTTCATACGGCAGCATTTGCAAGGTGCGTTCAAAGCCCCATTTTTCGACGAAAGGGTATTTGTTGTTTTTGTTGCAGGGTTTTTTGTTACCATTTGGATTGCTGCTGTGCTTTTCAAGTCGAATGATATTCTAAGGAAACAAACTGCGTTGAAGGTGTGGTGGTTCATGCTTGTTTTGTGTGGGGGGATGCGATTTGTTGTTTTATTAGTGTATGAAAAATTTGTTTTGTTTGTTGACTCTGGAGAGAGGAAAATACCTATTTTGATTGGGATTTCTTTTGGGTTCGCGCTTCATGTGGTTGGTGTTTATTGGTGGTATCAGAATGATGATCTCGTTTATCCCTTGATCATGCTTCCTCCCAGGGATATACCGCCGTTCTGGCACGCGATTTTCATCATCATGGTGAATGATACGTTGGTCCGACAGGCTGCAATGGTATTCAAGTGTATATTGTTGATGTATTACAAGAATAGCAGAGGCCGAAATTATCGTAAGCAGGGTCAAATGCTGACTTTAATTGAATACCTCCTTCTGCTTTACCGTGCCTTGTTGCCGACACCAGTTTGGTATCGTTTCTTCCTGAACAAAGAATATGGAAGCCTCTTTTCATCACTGATGACAGGATTGTATCTAACATTTAAACTCACATCTGTTGTTGAAAAGGTGCAATCCTTCTTTGCTGCTGTGAAGGCATTGTCACGTAAAGAAATGCACTATGGGGCTTATGCAACATCAGAGCAGGTCAATGCAGCCGGTGATCTTTGTGCTATTTGTCAGGAGAAGATGCATGCCCCAATCTTACTACGTTGTAAACATATTTTCTGTGAAGACTGTGTATCAGAGTGGTTTGAGAGAGAAAGGACCTGCCCATTGTGCAGAGCTTTAGTAAAACCTGCAGACCTTAGGTCATTTGGGGATGGCTCTACCAGCCTTTATTCTGAAATCATATATAAGTACAAGCCCGGAAGTTTTTTCTGCTTTGAAGCTTTACTTTTTCAAAGAAGCAATCGTGATCTATATACATCAACACATGTAAAATGCTCCGGAGGCCAATCATGGGGATACTCTGAGAAGATGAATGCAGCTGAATAG 1593 0.479 MEGNNADVFRQSSSPVGGSSSSPNSRRYSGILSASNIIQAPLSVLLEYSGILPSRSNHHSPPSPDAVDNDGEVSIRIIGPAEQDQHPREDAPPSPNAGLVVGLSHSQNDAVLPSASPRSDSEGVAADASPVAGDGAGRDSSYQRYDIQHAARWIEQVLPFSLLLLVVFIRQHLQGAFKAPFFDERVFVVFVAGFFVTIWIAAVLFKSNDILRKQTALKVWWFMLVLCGGMRFVVLLVYEKFVLFVDSGERKIPILIGISFGFALHVVGVYWWYQNDDLVYPLIMLPPRDIPPFWHAIFIIMVNDTLVRQAAMVFKCILLMYYKNSRGRNYRKQGQMLTLIEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFAAVKALSRKEMHYGAYATSEQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLYSEIIYKYKPGSFFCFEALLFQRSNRDLYTSTHVKCSGGQSWGYSEKMNAAE 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3165g00011 530 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 20 479 IPR044235 GO:0061630|GO:1904294
Mupr3165g00011 530 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 396 470 IPR013083 -
Mupr3165g00011 530 ProSitePatterns Zinc finger RING-type signature. 437 446 IPR017907 -
Mupr3165g00011 530 MobiDBLite consensus disorder prediction 81 100 - -
Mupr3165g00011 530 Pfam Zinc finger, C3HC4 type (RING finger) 420 463 - -
Mupr3165g00011 530 MobiDBLite consensus disorder prediction 1 28 - -
Mupr3165g00011 530 CDD RING-HC_RNFT1-like 420 460 - -
Mupr3165g00011 530 SUPERFAMILY RING/U-box 414 465 - -
Mupr3165g00011 530 ProSiteProfiles Zinc finger RING-type profile. 422 460 IPR001841 -
Mupr3165g00011 530 SMART ring_2 422 459 IPR001841 -
Mupr3165g00011 530 MobiDBLite consensus disorder prediction 111 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3165g00011 Mupr-Chr3165 87509 91221 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3165g00011 14 482 C3H Transcription Factor Family AT5G01960 65.190 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3165g00011 - K22379 aip:107639742 607.446