LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr3165g00001	ATGGTGGACAGAATGATGTTGCTAATAAGATATTCTGTGATGCCGGCTCTGAGAATTCATGGATATGCCTTGGCTGTTTCGTTTTGTTTTATCATCCTCATAGCAGCCTCACAGCGAACACACCCTTCAGAAGTTAATGCGCTGAGAAACATCAAGAAAAGTTTGATTGATCCTAAGGACAATCTGAGGAACTGGAATAAAGGTGATCCATGTGCAAGAAACTGGACTGGGGTTTGGTGTTTTGATAAGAAGGGGGATGATGGGTACTTCCATGTTCGTGAGATCTACTTGATGACAATGAATCTCTCGGGAAGTCTATCACCTCAGCTTGGTCAACTATCCCATCTTGAGATACTGGATTTCATGTGGAACAATTTGATAGGCACAATACCAAAGGAGATTGGAAACATTACATCATTGATATTCTTGCTCCTAAATGGGAATAAGTTATCTGGTAGTTTACCAGATGAGCTTGGCAACCTTTCAAATTTGAATAGATTCCAAGTAGACGAGAACCAATTGTCAGGTCCTATACCAGAGTCATTTGCCAACATGATCAATGTTAAACACCTTCACATGAACAACAACTCATTTAGCGGTCAACTTCCATCCTCACTTTCAAAGCTACCAAAACTTATTCACTTGCTTGTGGACAACAATAACTTATCTGGCCATCTTCCACCAGAATTCTCCATGTTACATTGGTTGGAAATACTCCAGCTTGATAATAACAATTTCAGCGGAAATGGAATTCCTTCTACCTATACAAACTTAACCAGGCTAGTGAAACTGCAAGATGGCCATTGTATAGGAAGAGTGTTGGGAAAGTCATGTTGTGTGATCTGTCCAATAATCGTCTCAACGGATCGATTCCTCGAAGCCTCTCATATCCTCATCTTCAAAACTTGTGAGAAGATACTCAGCAACCTGTCACTTGCGAATAATTTACTGTCTGGGCCCATCCCTGCTAGCATATGGCAGAACATGTCCTTCAGTGGGAAAGATAAACTTACAATTGATCTCCATAACAACTCATTTTCGAATGTTCAGGGAAATCTGAATCCCCCGTCAAATGTTACCTTGAGGCTTTCTGCTAATCCTATTTGCAAGAATTCTAGCATACAAAGTATTGGTCAATATTGTGGACCTGAAGGAGATAAGGCAGGACAAGACTCAACAAACTCAACAAACTCATCAACTGGCTGTCCAGTTCAAGCTTGTCCGGTGGATGAGTTTTATGAATATGCCCTCTCTTCCTCTGTTCCTTGCTATTGTGCAGCACCTCTGAGAATTGGATACAGGCTGAAAAGTCCAATACTTATTGATCCAGAGAAGAGAAAGATTAGTGTGGGCATAATAGTTGCTGCTGTAGTAGCAGCTGCTGCTTGTGTTTTAGCAATATCTGCAACAATCACTCTCCTGGTTTCTAGAAGAAATATGAAATACCAGCACAAGTTTTCCAGGAAACGAAAGAGACTAAAATGCTTGTTTCTTTATGCAGCCTCTAATATACCTATCAAAATCGATGGCATGAAATCATTTACTTACAAAGAATTGGCTCTTGCCACTAGCAAGTTTAATATCTCAACTAAAGTTGGCCAAGGAGGTTATGGGAATGTCTATAAAGGCATTTTATCTGATGAAACTTTTGTGGCCGTTAAGCGAGCAGAAGAAGGTTCCTTACAAGGACAAAAAGAGTTCTTGACTGAGATTGAGCTTTTATCAAGGTTACACCATCGAAATCTTGTCTCACTGATTGGATACTGTAATGAAGAAGGGGAGCAGATGCTGGTTTATGATTTCATGCCCAACGGCACCCTAAGAGACTGGATTTCTGGTAAAAGTAAAAAAACCAAGGGAAGCCTAAATTTCAGTGTGAGGTTGAACATTGCAATGGGTGCAGCCAAAGGCATACTTTATCTGCATACAGAGGCTAACCCTCCTATATTCCACCGAGATATTAAAGCCAGTAACATTCTTCTGGACTCCAAGTTTACTGCTAAAGTGGCCGATTTTGGACTGTCACGGCTTGTACCATACGAAGATGAAGAAGGAACTGCTCCTAAATATGTGTCAACAGTTGTGAAAGGAACACCAGGTTACCTGGACCCAGAATATTTGTTGACTCATAAGCTGACTGACAAATCTGATGTCTATAGCCTGGGAATTGTGTTTCTAGAGCTTTTGACAGGCATGCAACCAATATCACATGGGAAAAACATTGTCCGCGAGGTTAATATGGCTCGTCAATCTGGCACGATATATTCGATCATAGACAGCAGAATGGGGTTATATCCATCTGATTGCTTGGACCAGTTTTTAAGTCTGGCCCTGAGTTGTTGCCAAGACAATCCAGAGGAGAGACCATCAATGCTAGATGTGGTGAGGAAACTGGAAGATATCATTGCAATGTTGCCTGAAACTGAAACACTTTTCTCAGATGTTAGCTTAGACAGTTCTAGTAACATGGCACCCTCATCATCAGCATCAGCATCAGGATCCCATGTCACAAGGGAGGAGCAACACATGTCCTCGTATGTGTCGGGAAGTGATCTTGTCAGTGATGTCATTCCCACCATTGTTCCTCGCTGA	2592	0.414	MVDRMMLLIRYSVMPALRIHGYALAVSFCFIILIAASQRTHPSEVNALRNIKKSLIDPKDNLRNWNKGDPCARNWTGVWCFDKKGDDGYFHVREIYLMTMNLSGSLSPQLGQLSHLEILDFMWNNLIGTIPKEIGNITSLIFLLLNGNKLSGSLPDELGNLSNLNRFQVDENQLSGPIPESFANMINVKHLHMNNNSFSGQLPSSLSKLPKLIHLLVDNNNLSGHLPPEFSMLHWLEILQLDNNNFSGNGIPSTYTNLTRLVKLQDGHCIGRVLGKSCCVICPIIVSTDRFLEASHILIFKTCEKILSNLSLANNLLSGPIPASIWQNMSFSGKDKLTIDLHNNSFSNVQGNLNPPSNVTLRLSANPICKNSSIQSIGQYCGPEGDKAGQDSTNSTNSSTGCPVQACPVDEFYEYALSSSVPCYCAAPLRIGYRLKSPILIDPEKRKISVGIIVAAVVAAAACVLAISATITLLVSRRNMKYQHKFSRKRKRLKCLFLYAASNIPIKIDGMKSFTYKELALATSKFNISTKVGQGGYGNVYKGILSDETFVAVKRAEEGSLQGQKEFLTEIELLSRLHHRNLVSLIGYCNEEGEQMLVYDFMPNGTLRDWISGKSKKTKGSLNFSVRLNIAMGAAKGILYLHTEANPPIFHRDIKASNILLDSKFTAKVADFGLSRLVPYEDEEGTAPKYVSTVVKGTPGYLDPEYLLTHKLTDKSDVYSLGIVFLELLTGMQPISHGKNIVREVNMARQSGTIYSIIDSRMGLYPSDCLDQFLSLALSCCQDNPEERPSMLDVVRKLEDIIAMLPETETLFSDVSLDSSSNMAPSSSASASGSHVTREEQHMSSYVSGSDLVSDVIPTIVPR	863

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr3165g00001	863	ProSiteProfiles	Protein kinase domain profile.	526	802	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr3165g00001	863	Gene3D	Ribonuclease Inhibitor	197	404	IPR032675	-
	Mupr3165g00001	863	Pfam	Leucine rich repeat N-terminal domain	42	80	IPR013210	-
	Mupr3165g00001	863	FunFam	Probable LRR receptor-like serine/threonine-protein kinase At1g06840	42	203	-	-
	Mupr3165g00001	863	CDD	STKc_IRAK	532	801	-	-
	Mupr3165g00001	863	Gene3D	Transferase(Phosphotransferase) domain 1	602	813	-	-
	Mupr3165g00001	863	SUPERFAMILY	L domain-like	40	371	-	-
	Mupr3165g00001	863	Pfam	Protein kinase domain	527	796	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr3165g00001	863	FunFam	Leucine-rich repeat protein kinase family protein	491	601	-	-
	Mupr3165g00001	863	PANTHER	RECEPTOR-LIKE PROTEIN 55	51	801	-	-
	Mupr3165g00001	863	FunFam	LRR receptor-like serine/threonine-protein kinase HSL2	602	814	-	-
	Mupr3165g00001	863	SUPERFAMILY	Protein kinase-like (PK-like)	511	825	IPR011009	-
	Mupr3165g00001	863	MobiDBLite	consensus disorder prediction	823	847	-	-
	Mupr3165g00001	863	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	649	661	IPR008271	GO:0004672\|GO:0006468
	Mupr3165g00001	863	Gene3D	Phosphorylase Kinase; domain 1	499	601	-	-
	Mupr3165g00001	863	SMART	serkin_6	526	802	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr3165g00001	863	Gene3D	Ribonuclease Inhibitor	41	196	IPR032675	-
	Mupr3165g00001	863	ProSitePatterns	Protein kinases ATP-binding region signature.	532	554	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr3165g00001	Mupr-Chr3165	527	10761	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr3165g00001	510	810	Receptor kinase-like Gene Family	AT5G01950	67.110	4.33e-135	425

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Mupr3165g00001		Pkinase	6.8e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr3165g00001	-		-	ccaj:109788950	692.575