Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3162g00001 ATGGATTCGGAGGATTTCCGATCCATATTGGAGAGCGCGGGCGTCGACGTTTGGGTGTTGATGGACGCCGCCATCGCGGTGGCCTCCGCCGATTGCGGCGACGAATTGAAGCGCCGGAGAGACGGAATCGTGGAGCGCCTTTACGCGGCGACTTCGACGCCGCCGCCGCGGTGCCAGAACTGCGCGGCCGACGGCGCAGAAATCAAGGCGCAGAGCAGTCCCTCGGTGGAGGAGGAAAAGGATCCTTATGGAGGCTTGTTCGAGGACGAGCAGAAGAAGATTCTAGAGATTAGGGAGCAACTCGAGGATCCTCACCAGTCCGAAGATTCGGTGGTGGAGTTGTTACAGAATCTAGCAGACATGGATATTACATTCCAAGCGTTAGAAGAGACTGACATTGGGAGGCATGTGAATCGGTTGCGGAAGCATTCGTCTAATGATGTTAAGAGATTGGTGAAGTTACTCGTCAGGAAGTGGAAGGAAATTGTAGATGAATGGGTTAAGTTGAAGTCACCGGGAGAAGCGGGTGCTACTGCTGTCATGGCTGATGAGGACTCGCCTCAGCAGAAAATCCCACAAAATGGGCATCGTCAGGTTCCTGATTTTGCATACTCGCCAAATCCACACAGTGAGTACAATGAGAGTTTTGGGTCAGAGCGCAGCAATGTTGAACCACAAGTAAAACCAAAAGCAATTCCCCGCAAAGAAGCTCCCTCAAAACCATCGCCATCAGGCACCACTCTTTCTCCTCAAAACAGACAGAGAGAGAGCAATTTTGAGTCGGAGTCGGATAGGCTTGCTTCGGCAAGAAAACGGCTTCAAGAGAACTACAAAGAGGCTGCAAATGTTCGATGCATACTGACTACTATTTTGTCTGTTTTGTGTGGTGGGGGGTGTCTAGCCAAAAAGCAAAGAACGATTCAGGTGATGGACCTCCACGACTTACCAAAACCCAAGAATGCTTTCTTTGGAAAAAACAAAGGCGGCAGCGGTCAGGGAAGGCATTGGTGA 1011 0.5114 MDSEDFRSILESAGVDVWVLMDAAIAVASADCGDELKRRRDGIVERLYAATSTPPPRCQNCAADGAEIKAQSSPSVEEEKDPYGGLFEDEQKKILEIREQLEDPHQSEDSVVELLQNLADMDITFQALEETDIGRHVNRLRKHSSNDVKRLVKLLVRKWKEIVDEWVKLKSPGEAGATAVMADEDSPQQKIPQNGHRQVPDFAYSPNPHSEYNESFGSERSNVEPQVKPKAIPRKEAPSKPSPSGTTLSPQNRQRESNFESESDRLASARKRLQENYKEAANVRCILTTILSVLCGGGCLAKKQRTIQVMDLHDLPKPKNAFFGKNKGGSGQGRHW 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3162g00001 336 ProSiteProfiles TFIIS N-terminal domain profile. 89 166 IPR017923 -
Mupr3162g00001 336 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 92 173 IPR035441 -
Mupr3162g00001 336 SMART TFS2_5 94 165 IPR003617 GO:0005634
Mupr3162g00001 336 MobiDBLite consensus disorder prediction 240 256 - -
Mupr3162g00001 336 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 336 IPR044790 -
Mupr3162g00001 336 Pfam TFIIS helical bundle-like domain 114 163 IPR017923 -
Mupr3162g00001 336 MobiDBLite consensus disorder prediction 208 222 - -
Mupr3162g00001 336 Coils Coil 263 283 - -
Mupr3162g00001 336 CDD TFIIS_I 91 164 - -
Mupr3162g00001 336 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 87 176 IPR035441 -
Mupr3162g00001 336 MobiDBLite consensus disorder prediction 177 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3162g00001 Mupr-Chr3162 6740 8659 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mupr3162g00001 Med26 7.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3162g00001 - - gmx:100796457 505.368