LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr3156g00003	TGGTCCACGCCCAACCACGTCAAAGGCCACGCATTTCTTCAATCTGATCCACAAATGGATCGACCTGCTATGACTGTTGGGCCGGGAATGGATATGCCGATCATGCACGACAGTGATCGTTATGAACTTGTGCGAGACATTGGTTCTGGCAATTTCGGTGTAGCCAGGCTTATGAGGGACAAGCACACCGAGGAACTTGTTGCTGTCAAGTATATTGAGAGAGGTGAAAAGATAGATGAAAATGTACAAAGGGAAATTATAAATCACAGATCACTGAGGCATCCCAATATTGTCAGGTTTAAGGAGGTTATATTGACGCCAACACATTTGGCAATTGTGATGGAATATGCTTCTGGAGGAGAGCTATTTGAGCGAATATGCAATGCAGGGCGGTTCAGTGAGGATGAGGCACGCTTCTTCTTCCAACAACTTATATCAGGAGTTAGCTATTGTCATGCAATGCAAGTATGCCATCGTGACTTGAAGTTGGAAAATACATTGTTGGATGGTAGTCCAGCTCCTCGTTTGAAGATTTGTGATTTTGGCTATTCAAAGTCCTCGGTGCTACATTCACAACCAAAATCTACAGTTGGTACCCCTGCATACATTGCTCCTGAAGTTTTGCTTAAGAAGGAATATGATGGTAAGATTGCAGATGTGTGGTCTTGTGGGGTGACCTTATATGTCATGTTGGTGGGTGCATATCCTTTTGAGGATCCAGAGGAACCTAAAAATTTCCGCAAGACAATACATAGAATTTTGAATGTTCAGTACTCAATTCCTGACTATGTTCATATATCTCCAGAATGTCAGCATCTGATATCAAGGATTTTTGTTGCTGATCCTGCAAAGAGAATAACTATTCCTGAGATTAGAAACCACGAGTGGTTTTTGAAGAACCTTCCAACCGATCTCATGGATGGGAGTACCAACAACCAGTTTGAGGAGCCTGATCAACCAATGCAAAGCATAGAAGAAATCATGCAGATAATTAGGGAGGCTACAATTCCTGCAGCTGGATCTGAGTCTCTAAACCATGATCTTACTGGTAGCTTGGATATTGATGAGGACATGGATTCAGATCCTGACCTTGACTTAGATACCAGTGGAGAAATAGTTGTCCACTACTCCCTTCATGATCTTGGTCTTGGTGCATGTCCTATAAGG	1167	0.4276	WSTPNHVKGHAFLQSDPQMDRPAMTVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKHTEELVAVKYIERGEKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYSIPDYVHISPECQHLISRIFVADPAKRITIPEIRNHEWFLKNLPTDLMDGSTNNQFEEPDQPMQSIEEIMQIIREATIPAAGSESLNHDLTGSLDIDEDMDSDPDLDLDTSGEIVVHYSLHDLGLGACPIR	389

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mupr3156g00003	389	SUPERFAMILY	Protein kinase-like (PK-like)	32	316	IPR011009	-
Mupr3156g00003	389	PANTHER	SERINE/THREONINE KINASE	40	325	-	-
Mupr3156g00003	389	Gene3D	Phosphorylase Kinase; domain 1	19	116	-	-
Mupr3156g00003	389	CDD	STKc_SnRK2-3	40	296	-	-
Mupr3156g00003	389	ProSiteProfiles	Protein kinase domain profile.	41	297	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mupr3156g00003	389	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	156	168	IPR008271	GO:0004672\|GO:0006468
Mupr3156g00003	389	FunFam	Serine/threonine-protein kinase SRK2E	32	116	-	-
Mupr3156g00003	389	ProSitePatterns	Protein kinases ATP-binding region signature.	47	70	IPR017441	GO:0005524
Mupr3156g00003	389	Gene3D	Transferase(Phosphotransferase) domain 1	117	305	-	-
Mupr3156g00003	389	Pfam	Protein kinase domain	41	297	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr3156g00003	Mupr-Chr3156	28228	36504	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr3156g00003	34	307	CBL-interacting serine-threonine protein kinases	AT4G24400	43.816	2.58e-69	222

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_OST1L	Mupr3156g00003		Pkinase	2.1e-72	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr3156g00003	K14498		-	gmx:100796253	676.781

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