Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3153g00002 ATGCTGCATGTTTTTGGGAGGAAATTTAGTGTTAGGAGCAAGAATCAAAATGTAGTAGCTCAGTCTAGTACAGAAGCAAAATTTCAATCTACAACACATGGTATATGTGAGACAAATGGTATATGTGAGGGGTTATGGTTGAAGATCATCCTTGATAACCTTAAGATAAAATATGCAGAATTTATTGACAATTACTTCATCAAAGAGAGATTGGACACTGATCTTACAACCATAGCCTATGTCCCTATGGGACTTCAATTGGCACAAGCTCTTCAGTTAAATAATACAGAATTGTTGAGATGTCCCATCAGAGTTGGTCTAGCTCGAGAAAAGCGTAAATATATCCCCAATAGAAGTTTTCACGATAATAATTTTAGAAACTCATTTCAAAGGAGTGAAAGATTTCAGCCTGTGAAAGGTTCAGAGATTTCAAGGGACTGTGAACAAGAAACTGAGGAAAAAGCCTCCAAAACTCTTCAGAAAAGTCCAAAAATGCTAGCTACATGGCAAGAACAAAATGCTACATCAAAGACAATATATTGTAGAAACTTGTCATACAGTGTGGTGCGGGATGATATGGAAATATTTTTCGAAGAGTGTGGAGAAATTGTTGATATTCGTCTACATACTGATCATGAAGGGAGGATTAAAGGCTATGGACATGTTGAGTTTGCAACCACCGAAGCAGCACAAAAAGCTCTTCAATTGAATAATACAGTATTTTTGGGACGTCGCATTGGAGTTGGTATAGCTCATGAAAAGAAAGAATATACCTCCTATAGAAGCAACTGGAGCAAGTCATTCCACCAGAGTGAAAGAACTCAGCCTATCAAAAGTACACAGAGTTCAGAGTACTGTGAGGAAGAAATTGAGGGAAAAGCCTCCGAAAGTCCTTGGGAAAGTTCTAAAAGGCTAGCTACTTTGAAAGAGCAAAATGCTCAACCAAAGACAATATATGTCAGAAACTTGTCATACAGCGTCGAACCGGCTGATATGTATATGATCAGGGAAAATCTTTTCAAAGTATGTGGAAAAATTGTTGATATTCGTCTACATACGGATCACAAAGGGAGGTTAAACGGCTTTGGAAAAGTTGAGTTTGCGACAGAAGAAGCTGCAAAAAAAGCTCTCGAGTTCGATAATATTGAGTTGTTGAGACGTCCCATTGGAGTTTATTTGGCTCGAGAAAAAGGTGACTATACCTACAATAGAAGCAACTGGAGCAACTCATTCCAGAGGTGTGATAGAAATCAGTCTCGAACTATATTTGTGAAGGGTTTTAATAGTTCCCTTCCAACGGAAGAGATAAAAGCTAGCCTAGAAGAGCATTTTGGTTATTGTGGAGAGATTGCAAGGATATCAGTTCGGAAATCTCATGATTTTGGTGCTATTAAG 1395 0.3806 MLHVFGRKFSVRSKNQNVVAQSSTEAKFQSTTHGICETNGICEGLWLKIILDNLKIKYAEFIDNYFIKERLDTDLTTIAYVPMGLQLAQALQLNNTELLRCPIRVGLAREKRKYIPNRSFHDNNFRNSFQRSERFQPVKGSEISRDCEQETEEKASKTLQKSPKMLATWQEQNATSKTIYCRNLSYSVVRDDMEIFFEECGEIVDIRLHTDHEGRIKGYGHVEFATTEAAQKALQLNNTVFLGRRIGVGIAHEKKEYTSYRSNWSKSFHQSERTQPIKSTQSSEYCEEEIEGKASESPWESSKRLATLKEQNAQPKTIYVRNLSYSVEPADMYMIRENLFKVCGKIVDIRLHTDHKGRLNGFGKVEFATEEAAKKALEFDNIELLRRPIGVYLAREKGDYTYNRSNWSNSFQRCDRNQSRTIFVKGFNSSLPTEEIKASLEEHFGYCGEIARISVRKSHDFGAIK 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3153g00002 465 MobiDBLite consensus disorder prediction 140 159 - -
Mupr3153g00002 465 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 177 253 IPR000504 GO:0003723
Mupr3153g00002 465 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 154 278 - -
Mupr3153g00002 465 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 316 396 IPR000504 GO:0003723
Mupr3153g00002 465 MobiDBLite consensus disorder prediction 284 298 - -
Mupr3153g00002 465 SUPERFAMILY RNA-binding domain, RBD 315 459 IPR035979 GO:0003676
Mupr3153g00002 465 SMART rrm1_1 178 249 IPR000504 GO:0003723
Mupr3153g00002 465 SMART rrm1_1 317 392 IPR000504 GO:0003723
Mupr3153g00002 465 MobiDBLite consensus disorder prediction 271 302 - -
Mupr3153g00002 465 Gene3D - 125 263 IPR012677 -
Mupr3153g00002 465 Gene3D - 264 406 IPR012677 -
Mupr3153g00002 465 SUPERFAMILY RNA-binding domain, RBD 169 270 IPR035979 GO:0003676
Mupr3153g00002 465 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 179 246 IPR000504 GO:0003723
Mupr3153g00002 465 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 318 389 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3153g00002 Mupr-Chr3153 24297 35144 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3153g00002 173 399 Eukaryotic Initiation Factors Gene Family AT3G16380 26.201 5.53e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3153g00002 - - gmx:102664796 520.776