Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3143g00001 ATGAAATGGGTCGTTGAGAGATATGAATTTGATATTGGGGTGATGGATCAGGCAAAAAGCAAAGGCAGCGGTGAGATATTGGACCATGTTGATGAAAAGGTGGATGGGGATTTGAACCAATTGGTTGAAGGAAATGCAATTGATGCAGGAGCTGCAGAGAGTGTAAGTGGGGAAGATTGGACTTCAGAAGAGATGTGCAATGATCTTGGATTGAATCGGGAACTAAAGGAGGGGCCTCAAGTTAATGATCAAGACATGGGTGACTCACAAGAAATTAATGATACATTGCATGGGGTTGATCAAGGAACTAGTTATAGTTCAAGAAATTTGGTTAATGGGAAAGTACCTGAGACTTGTGTTGTAATAGATCCTTCTCCTCAGATTGAGTGTGTCAATGGAGACAATAGGAAATTGGAAGCAAAACCTAATGAATCAGGGTTGAGCAAGGTGTCCATGAAAGCGCCCAAAGGGGTGTCTGAGACAGATACAAATTCGTGTGTGATTGATATAAACCGTGGCAGCTGCGATGGGTTTAGTGAGAATATGGAAGGTGAAATGATTTGTAGGATTTGCCATCTGGCCTCTGGACAACCGTTAGAAGCTATTGACACTGCAAACAGTGCTACTAGTAATACAGATTTGATTCACCTTGGCTGTTCATGTAAAGATGAGCTAGGCATTGCGCACAGTCATTGTGCTGAGGCATGGTTCAAGCTTAAAGGAAACAGGTTGTGTGAAATATGTGGTGAGACTGCAAAAAATGTTTCGGATGTTACTGATAATGGATTTATGGAAGAGTGGAATGAAGCTAGATTCATCATGGACAGTGATAATACCTCATCAAGCAGGTTTGGTGGATGCTGGCGGGGACAGCCATTTTGTAACTTCTTAATGGCGTGCCTGGTAATAGCTTTTGTTCTACCATGGTTCTTTCGTGTTGTTCAAAAGCAATATACTCACACTTGCCTTAATTTTAATTCGAATGAGTGG 990 0.4172 MKWVVERYEFDIGVMDQAKSKGSGEILDHVDEKVDGDLNQLVEGNAIDAGAAESVSGEDWTSEEMCNDLGLNRELKEGPQVNDQDMGDSQEINDTLHGVDQGTSYSSRNLVNGKVPETCVVIDPSPQIECVNGDNRKLEAKPNESGLSKVSMKAPKGVSETDTNSCVIDINRGSCDGFSENMEGEMICRICHLASGQPLEAIDTANSATSNTDLIHLGCSCKDELGIAHSHCAEAWFKLKGNRLCEICGETAKNVSDVTDNGFMEEWNEARFIMDSDNTSSSRFGGCWRGQPFCNFLMACLVIAFVLPWFFRVVQKQYTHTCLNFNSNEW 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3143g00001 330 SUPERFAMILY RING/U-box 184 251 - -
Mupr3143g00001 330 PANTHER ZINC FINGER, RING-CH-TYPE 87 313 - -
Mupr3143g00001 330 SMART ringv_2 187 249 IPR011016 GO:0008270
Mupr3143g00001 330 MobiDBLite consensus disorder prediction 137 156 - -
Mupr3143g00001 330 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 173 260 IPR013083 -
Mupr3143g00001 330 ProSiteProfiles Zinc finger RING-CH-type profile. 180 255 IPR011016 GO:0008270
Mupr3143g00001 330 Pfam RING-variant domain 188 248 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3143g00001 Mupr-Chr3143 11033 14732 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3143g00001 168 311 C3H Transcription Factor Family AT5G05830 40.541 1.00e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3143g00001 - - gmx:100791129 531.561