Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3141g00006 ATGCACATCAAATTGGCGCAATCATCGTTCCGGGATCGGACGCAGGAATTCCATAGCATCACGGAGAGGTTGAAGAAGTCCGGATCAGGGCCCAATGGGCCTAGCAGCAGCAGCAGCACTTCTTCCAGATCGGAGGAACAGCGGTCGGCGATCACAAACCAATCGGAGTTCAATCGAAGGGCCTCCAAAATCGGCTTTGGGATTCACCAAACGTCTCAGAAGCTCGCCAAGCTCGCCAAGACTTCGGTTTTCGACGACCCTACTATGGAAATCCAAGAGCTCACTGGTGTTATTAAGCAAGACATCACTGCCCTAAACTCTGCGGTTGTGGATCTTCAGTTACTCTGCAATTCTAGAAACGAGAGTGGAAACGTTTCCGCTGACACGACGAGCCATTCGAGCACGGTGGTTGATGATTTGAAGACGCGGTTGATGAGCGCCACCAAAGAGTTTAAGGATGTTCTCACGATGAGAACTGAGAACATGAAAGTGCACGAGAATAGAAGACAAATGTTTTCGTCTTCTTCTAAGGATTCTGCGAATCCTTTCATCCGGCAGCGGCCGTTGGCTGCGAGGGCATCTGCTAGTACTTTTGATGCCCCTGCTCCTCCCTGGGCTAATGCATCGCCATCTTCGTCTCAGGTGTTTCCTAAGAAGCAAGAGGATGGGGAGAGACAACCATTGTTGCAACAACAGCAGCAGCAACAGGAGGTAGTTCCATTGCAAGACAGTTACATGCAAAGCAGAACTGAAGCTCTTCAGAATGTTGAGTCCACTATTCATGAGCTTAGCAACATTTTTAATCAGCTAGCAACACTTGTTTCCCAACAAGGAGAGATTGCCATCAGGATTGATGAAAACATGGATGATACATTGGCAAACGTAGAGGGGGCACAAGGGGCTTTGTTGAAGTATCTGAACAGCATATCTTCTAATAGCATAGAAAAGCAATACCGTGATAATGCCTTCATGAGCTGA 978 0.4806 MHIKLAQSSFRDRTQEFHSITERLKKSGSGPNGPSSSSSTSSRSEEQRSAITNQSEFNRRASKIGFGIHQTSQKLAKLAKTSVFDDPTMEIQELTGVIKQDITALNSAVVDLQLLCNSRNESGNVSADTTSHSSTVVDDLKTRLMSATKEFKDVLTMRTENMKVHENRRQMFSSSSKDSANPFIRQRPLAARASASTFDAPAPPWANASPSSSQVFPKKQEDGERQPLLQQQQQQQEVVPLQDSYMQSRTEALQNVESTIHELSNIFNQLATLVSQQGEIAIRIDENMDDTLANVEGAQGALLKYLNSISSNSIEKQYRDNAFMS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3141g00006 325 MobiDBLite consensus disorder prediction 25 56 - -
Mupr3141g00006 325 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 243 305 IPR000727 -
Mupr3141g00006 325 SUPERFAMILY t-snare proteins 54 298 IPR010989 GO:0016020|GO:0016192
Mupr3141g00006 325 CDD SNARE_syntaxin5 246 312 - -
Mupr3141g00006 325 ProSitePatterns Syntaxin / epimorphin family signature. 249 288 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mupr3141g00006 325 Gene3D - 50 298 - -
Mupr3141g00006 325 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 8 26 IPR021538 -
Mupr3141g00006 325 PANTHER SYNTAXIN 51 311 IPR045242 -
Mupr3141g00006 325 SMART tSNARE_6 238 305 IPR000727 -
Mupr3141g00006 325 MobiDBLite consensus disorder prediction 1 23 - -
Mupr3141g00006 325 MobiDBLite consensus disorder prediction 191 237 - -
Mupr3141g00006 325 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3141g00006 Mupr-Chr3141 58890 63192 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3141g00006 1 312 SNARE and Associated Proteins AT3G24350 60.588 5.33e-122 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3141g00006 K08490 - gmx:100811494 498.819