Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3141g00004 ATGCACACTAAATCGGCGCAGTCATCATTTCGGGATCGGACGCATGAATTCCAGAGCATAGCAGAGAAGTTGAAGAAGACAGGACCAGCGCTAAATGGACAAAGCAGCACCTCATCCAGATCGGAGGAACAGCGATCGGCAATTGCAAATCAATCAGAGTTCAATAAAAGAGCTTCAAAGATCGGCTTCGGGATTCACCAAACGTCTCAGAAACTCGCCAAGCTCGCCAAGTTGGCTAAGAGGACTTCGGTTTTTGACGACCCTACCATGGAAATCCAAGAGCTCACGGGTGTTATTAAGCAAGATATCACTGCTCTAAACTCTGCGGTTGTAGATCTTCAGTTACTCTGCAACTCTCGGAACGAGAGTGGGAACACTTCCACCGACACGACAAGCCATTCAACCACGGTTGTGGATGACCTCAAGACCCGGTTGATGAGCACCACCAAAGAGTTTAAAGATGTTCTCACCATGCGAACTGAGAACTTGAAAGTGCATGAGAATAGAAGACAGCTGTTTTCGTCCTCTGCTTCGAAGGATTCTGCAAATCCTTTTGTCCGGCAACGGCCATTGGCTACAAGGTCGGCTGCTAGTGCTTCCAATGCCCCTGCTCTACCATGGGATACCGGCTCATCTTCATCTCAGTTGTTTCCTAAGAAGCAGGTGGATGGGGAGAGTCAACCATTGCTGCATCAACAGCAGCAGCAGGAGGTAGTTCCATTGCAAGACAGTTACATGCAAAGCAGAGCTGAAGCTCTTCAGAATGTTGAGTCCACTATTCATGAGCTCAGCAACATCTTTAATCAACTAGCAACACTTGTTTCCCAACAGGGAGAGATTGCCATCAGGATTGATGAAAACATGGATGATACATTGGCAAACGTAGAGGGGGCGCAAGGGGCTTTGTTGAAGTATCTGAACAGCATATCTTCTAATAGGTGGCTGATGATCAAGATTTTCTTTGTATTAATATTTTTTCTTATGGTTTTCTTATTTTTTGTGGCATAG 1008 0.4603 MHTKSAQSSFRDRTHEFQSIAEKLKKTGPALNGQSSTSSRSEEQRSAIANQSEFNKRASKIGFGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTGVIKQDITALNSAVVDLQLLCNSRNESGNTSTDTTSHSTTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQLFSSSASKDSANPFVRQRPLATRSAASASNAPALPWDTGSSSSQLFPKKQVDGESQPLLHQQQQQEVVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEIAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3141g00004 335 MobiDBLite consensus disorder prediction 1 47 - -
Mupr3141g00004 335 ProSitePatterns Syntaxin / epimorphin family signature. 249 288 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mupr3141g00004 335 MobiDBLite consensus disorder prediction 193 233 - -
Mupr3141g00004 335 PANTHER SYNTAXIN 48 327 IPR045242 -
Mupr3141g00004 335 MobiDBLite consensus disorder prediction 1 22 - -
Mupr3141g00004 335 SMART tSNARE_6 238 305 IPR000727 -
Mupr3141g00004 335 MobiDBLite consensus disorder prediction 29 47 - -
Mupr3141g00004 335 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 7 26 IPR021538 -
Mupr3141g00004 335 MobiDBLite consensus disorder prediction 192 233 - -
Mupr3141g00004 335 Pfam SNARE domain 279 331 IPR000727 -
Mupr3141g00004 335 Gene3D - 48 298 - -
Mupr3141g00004 335 CDD SNARE_syntaxin5 246 324 - -
Mupr3141g00004 335 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 243 305 IPR000727 -
Mupr3141g00004 335 SUPERFAMILY t-snare proteins 51 298 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3141g00004 Mupr-Chr3141 52784 57413 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3141g00004 1 335 SNARE and Associated Proteins AT3G24350 65.289 5.04e-150 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3141g00004 K08490 - gmx:100810956 525.398