Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3140g00001 ATGGGGTGTGTGAGTTCGAAGCAGGCGGTGTCGGTGACACCGGCGATTGACCACTCGGGGGCGTTTCGGAGCAATGCGGGTTTGGACGAGTCGGGAAGGAAGGAGAAGCGGAACAGGAAGAGGACCGAGTCGGGAGGAGCGAGTCAGAGCGAGGTGGGTGAGTCGGGGAGGACGAGTTCGAATTGCGAGTCGCTGAGCTTCAGGTTGGGGAACCTTCAGAAGTACGTGCAGGGAGAACACGTGGCGGCTGGCTGGCCGGCGTGGCTCAGCGCCGTCGCCGGCGAAGCCATTCACGGCTGGGTTCCCCTCCGCGCCGATGCCTTTGAAAAACTCGAGAAGATAGGGCAGGGAACGTATAGCAGTGTGTTTCGGGCGAGGGAGCTTGAGACGGGGAAGATAGTGGCCTTGAAGAAGGTGCGGTTCGATAATTTCGAACCGGAGAGTGTGCGGTTCATGGCGCGTGAGATAATGATTCTTCGACGCCTTGATCATCCCAATATCATAAAGCTAGAGGGCCTGATTACTTCGAGGTTGTCGTGTAGCATTTACCTCGTGTTTGAGTACATGGAGCATGACATTACAGGGCTCTTGTCTTCCCCTGATATCAAGTTCACTGAACCGCAGATTAAGTGCTACATGAAGCAGTTGTTGGCTGGTCTTGAGCACTGTCACTTGCGGGGAGTCATGCATAGGGACATTAAGGGGTCGAATCTTTTGGTGAATAATGAAGGGGTTTTGAAGGTGGCGGATTTTGGGTTGGCGAATTATGTCAATTCTGGGCACAGGCAACCTCTGACTAGTCGAGTTGTCACCTTGTGGTACCGGCCCCCGGAGCTTTTGCTTGGTTCAACGGATTATGGTCCAGCCGTGGATCTTTGGAGTGTTGGCTGCGTGTTTGCAGAGCTGCTTGTTGGGAAGCCTATACTTCAGGGGAGAACGGAGGTTGAACAATTGCACAAAATTTTCAAGCTATGCGGCTCACCACCCGATGAATACTGGAAAAAGACTAGACTTCCTCATGCAACTTTATTTAAGCCACAGCAACCATATGATAGTTGCCTTCGACATTCTTTTAAAGATTTGCCAGCGACCAGTGTACATCTGCTACAGACTCTTCTTTCGGTGGAACCATACAAACGTGGGACCGCCACATCTGCTCTCTCATCAGAGTATTTCAAAACAAAACCTTATGCATGTGACCCATCAAGCTTGCCAATATACCCACCTAGCAAGGAAATCGATGCAAAACACCGGGAAGAGTCAAGAAAAAAGATTAGTGGACGAGTTCGTGGAACTGAAACAAGAAAACCATCAAGAAAGCCACCAGGATTCAATAAACTAGCCCCAGCAGAGGACTTGGTGAGTCAAACTCAGACTTCCCAAAAGGTGAATGGTAGATCCTTACGCATCCTTGAAGAAGAGAAGACTAAAATATGTGACAAAGCACAAAAGCTGTCTAGTGGTAAACCTGAAGACGCTTCCCATGTAAAGAATGCATCGCATGGAGATATTCCTCTTTCTGGACCATTACAAGTTTCAACATCAAGTGGCTTTGCATGGGCAAAAGGCCGTAAAGATGATACTTCATTTCGATCCCATTGTCGAACAATTTCAAGAGGACATATTTTCAATCCATTAGAACCTTCTACATTAAATTCAAGGAGTAATTTGGACACGACAAAGGAAAATAAGGAGTTTTGTGGAGGATATACCAATTCTAGGGGCCATGAACTACTTGAAATTCCTAAGCTTTCAATGCAGAATCAGTGGAGTAAGTTTGATCGCCCAGATTCATTTGATGCTTCAGATGAGTACCACTCGCAAGAATTGTCTATGGCCCTTTATCACAGAGAAGATTCAGCATCCAAGAGAAGTAACATGAGTTGTCAAGATCAAGGAGAAAAGGTTGAATATTCTGGACCCCTACTATCTCAAATGCACACAGTTGATGAGCTATTGGAAAGACATGAGCGTCACATCCGGCGAACTGTCCGGAGATCATGGTTTCAGACAGGTAAGAAGCATGAGAAATAA 2034 0.4764 MGCVSSKQAVSVTPAIDHSGAFRSNAGLDESGRKEKRNRKRTESGGASQSEVGESGRTSSNCESLSFRLGNLQKYVQGEHVAAGWPAWLSAVAGEAIHGWVPLRADAFEKLEKIGQGTYSSVFRARELETGKIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSSPDIKFTEPQIKCYMKQLLAGLEHCHLRGVMHRDIKGSNLLVNNEGVLKVADFGLANYVNSGHRQPLTSRVVTLWYRPPELLLGSTDYGPAVDLWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTRLPHATLFKPQQPYDSCLRHSFKDLPATSVHLLQTLLSVEPYKRGTATSALSSEYFKTKPYACDPSSLPIYPPSKEIDAKHREESRKKISGRVRGTETRKPSRKPPGFNKLAPAEDLVSQTQTSQKVNGRSLRILEEEKTKICDKAQKLSSGKPEDASHVKNASHGDIPLSGPLQVSTSSGFAWAKGRKDDTSFRSHCRTISRGHIFNPLEPSTLNSRSNLDTTKENKEFCGGYTNSRGHELLEIPKLSMQNQWSKFDRPDSFDASDEYHSQELSMALYHREDSASKRSNMSCQDQGEKVEYSGPLLSQMHTVDELLERHERHIRRTVRRSWFQTGKKHEK 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3140g00001 677 SMART serkin_6 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3140g00001 677 MobiDBLite consensus disorder prediction 481 498 - -
Mupr3140g00001 677 Gene3D Transferase(Phosphotransferase) domain 1 191 430 - -
Mupr3140g00001 677 MobiDBLite consensus disorder prediction 45 60 - -
Mupr3140g00001 677 MobiDBLite consensus disorder prediction 21 60 - -
Mupr3140g00001 677 MobiDBLite consensus disorder prediction 411 440 - -
Mupr3140g00001 677 MobiDBLite consensus disorder prediction 28 44 - -
Mupr3140g00001 677 Gene3D Phosphorylase Kinase; domain 1 95 190 - -
Mupr3140g00001 677 MobiDBLite consensus disorder prediction 411 461 - -
Mupr3140g00001 677 MobiDBLite consensus disorder prediction 619 642 - -
Mupr3140g00001 677 PANTHER CELL DIVISION PROTEIN KINASE 106 396 - -
Mupr3140g00001 677 Pfam Protein kinase domain 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3140g00001 677 MobiDBLite consensus disorder prediction 481 510 - -
Mupr3140g00001 677 CDD STKc_CDK9_like 108 392 - -
Mupr3140g00001 677 FunFam probable serine/threonine-protein kinase At1g54610 95 190 - -
Mupr3140g00001 677 SUPERFAMILY Protein kinase-like (PK-like) 101 399 IPR011009 -
Mupr3140g00001 677 ProSiteProfiles Protein kinase domain profile. 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3140g00001 677 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Mupr3140g00001 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Mupr3140g00001 677 FunFam probable serine/threonine-protein kinase At1g54610 191 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3140g00001 Mupr-Chr3140 8146 14057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3140g00001 100 442 Core Cell Cycle Gene Families AT5G10270 49.311 1.99e-114 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mupr3140g00001 Pkinase 5.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3140g00001 - - gmx:100803328 1251.5