Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3135g00003 ATGGATAATAATGTATGTACACCCTCATTTTCCCTACCCTTTGAGAATGGCTCCATGGAAAATAGTTCTACTAGTTTCTCCAACCATTTTAGGGGCTCCACTATTGTTGGTTTAAATAGAGATTCTTTATCCTTTGCTAACATCAATAGCTTCGACAAACTTTCACCATTATTATCGCAACCATTATCATCACCGCCGTCACCGCCACCATCACCATCTCCACCACCATCACCTATCCATGCTATCCCCTCTAAATTAGATTTTCCTCCTCATGAATTAAACAAACAAATAGAACCACAATTTGCTATGGTTGCATTTGATAAGAGACCTAGAGGGAGGCCACCTGGCTCAAAGAATAAGCCTAAGAAAATTGTAAAACTACCGATCTCATCTAGCTTCAACTTGCAAGAAAGAAAAGACTTTCTTAAACCTGTAGTCCTTATTGTTCCTGCTGGCATGGATATTGTGAATGCCATCATCAACTTCGCTCACAATCGAAATGTTAGCATCTCGGTGCACCATGCTTTGGGTGCCATATCTGAAGTTAACCTTCGCAACTCTCTCTCCCCTTTTGATGATTTATCCTTTCGGGGAAACTTGATTATGTCATCTTTCTCAGGCTTTTACACCAACAATCTTTCACCTTCAGCCCCCAACAACATTCCTTATTCCTCTTTCATGATTCAACTTTCAAGAGGAGGGACCCCCCAACTCTTTGGTGGCCTTGTTGGTGATAAGCTTATTGCTGCGGAACCTATGCAAGTTGTAGCTTCTATCATAAACAAACACGAGTACCACAAGGTGGTACACCCGATCATCAATCCAAATGTTCAACCTGGTATGGAGAGTACTCATGCTAATCATTATGCTTCTACCATGAGAAATGCTCTTGGTAGCATCAACAACAACACCACCAATCACCCTCGTTTCTTTGTTGGATCTTCAACCTCATCCCCAATGAATGTTCAACTTCCTACTACTCCTACAAATATAGATGCGAAGATTTCTACTATAAAAAACGATGACTGA 1029 0.4091 MDNNVCTPSFSLPFENGSMENSSTSFSNHFRGSTIVGLNRDSLSFANINSFDKLSPLLSQPLSSPPSPPPSPSPPPSPIHAIPSKLDFPPHELNKQIEPQFAMVAFDKRPRGRPPGSKNKPKKIVKLPISSSFNLQERKDFLKPVVLIVPAGMDIVNAIINFAHNRNVSISVHHALGAISEVNLRNSLSPFDDLSFRGNLIMSSFSGFYTNNLSPSAPNNIPYSSFMIQLSRGGTPQLFGGLVGDKLIAAEPMQVVASIINKHEYHKVVHPIINPNVQPGMESTHANHYASTMRNALGSINNNTTNHPRFFVGSSTSSPMNVQLPTTPTNIDAKISTIKNDD 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3135g00003 342 Gene3D - 143 278 - -
Mupr3135g00003 342 MobiDBLite consensus disorder prediction 57 89 - -
Mupr3135g00003 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 100 269 IPR014476 GO:0003680
Mupr3135g00003 342 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 259 IPR005175 -
Mupr3135g00003 342 CDD DUF296 143 257 IPR005175 -
Mupr3135g00003 342 ProSiteProfiles PPC domain profile profile. 139 287 IPR005175 -
Mupr3135g00003 342 MobiDBLite consensus disorder prediction 61 83 - -
Mupr3135g00003 342 SUPERFAMILY AF0104/ALDC/Ptd012-like 142 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3135g00003 Mupr-Chr3135 19265 20684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3135g00003 108 268 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 33.136 9.08e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3135g00003 - - ccaj:109792018 234.572