Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3133g00001 ATGGCCAAGAGGGAGCGAGGGAGAGGAGTATCGGCCTCGGAATTGAAGGAGAAGTTGCGCGAATTGGTCAAGTCCATCGTCGATTCCGATGACTACACGCCGCAAGCCGCCGATGAGGCCATCGCCGTCCTTTCTGCTCTGAAAGATTTCAAGTCTCCAAACTCTCTGGACGAGTTTCCCCTTCCACCCGAATTTCGCTGCCCCATTTCAACCCAATTGATGATCGATCCCGTTATCTTGTCCACCGGCCAGACTTATGATAGGCCTTTCATTGAGAGGTGGTTGAAAGAAGGGCACAGAACGTGCCCTCAGACTCAGCAGGTTCTCTCTCACTCCATTCTAACTCCTAATTACTTGGTCAGAGACATGATTCTCCACTGGTCTAGGGACCGTGGAATTGACCTGCCTATACCTGCTAATGACATCGATCAAGTGGTCTCCAATGTAGACAGAAACCATTTGAATTCGTTGCTTCAAAAGTTGTCATTGTCTCTTTCTGAACAGAAAGAAGCTGCCAAAGAGCTTCGCTTGTTGACAAAGCGAATGCCTTCCATTCGAACCCTTGTTGGGACGTCCAGCGATGTGATTTCCCAGTTGCTGACTCCCTTATCGTCTCCTTCTACCGACCCTGATCTCCATGAGGACTTGGTCACCACTCTTCTCAATCTCTCTATTCATGACGACAATAAGAAGGCGTTTGCCGAGGATCCTGCACTCATTTCTCTGCTTGTTGATGCCTTGAAATGTGGAACTGGAACCATTCAAACCAGAAGCAATGCTGCGGCTGCTATTTTCTCCTTGTCGGCCCTTGATTCCAACAAGCTCATCATTGGAAAATCTGGGGCTATTAAGCATTTGCTTGAGCTTTTAGAGGAGGGGCAGCCATTGGCCATGAAAGATGCTGCTACCGCCATATTCAACTTGTGTCTTGTGCATGAGAATAAAGGGAGGACCGTGCGAGATGGGGCAGTTCGGGTTATTCTGGACAAGATCATGGACCACATTCTAGTTGATGAGTTGTTGGCTATACTAGCACTTCTCTCCAGCCATCCCAAGGCTGTGGAAGAAATGGGTGATCTAGGTGCTGTTCCTGTCTTATTGGGGATTATTAGGGAGAGCGCGTTAGAGAGGAGCAAGGAAAATTGTGTTGCTATTCTGTATACAATCTGTTTTAGTGATAGAACCAAGTTGAAGGAAATTAGAGAAGAAGAAAAGGCCAACCGTACACTGTCAAAGCTTGCACAGTGTGGAACTTCAAGGGCAAAAAGAAAGGCTAACGGTATTCTTGAGAGGCTCAATAGATCTTACTCCTTAACCCACACTGCTTAG 1329 0.474 MAKRERGRGVSASELKEKLRELVKSIVDSDDYTPQAADEAIAVLSALKDFKSPNSLDEFPLPPEFRCPISTQLMIDPVILSTGQTYDRPFIERWLKEGHRTCPQTQQVLSHSILTPNYLVRDMILHWSRDRGIDLPIPANDIDQVVSNVDRNHLNSLLQKLSLSLSEQKEAAKELRLLTKRMPSIRTLVGTSSDVISQLLTPLSSPSTDPDLHEDLVTTLLNLSIHDDNKKAFAEDPALISLLVDALKCGTGTIQTRSNAAAAIFSLSALDSNKLIIGKSGAIKHLLELLEEGQPLAMKDAATAIFNLCLVHENKGRTVRDGAVRVILDKIMDHILVDELLAILALLSSHPKAVEEMGDLGAVPVLLGIIRESALERSKENCVAILYTICFSDRTKLKEIREEEKANRTLSKLAQCGTSRAKRKANGILERLNRSYSLTHTA 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3133g00001 442 Pfam U-box domain 62 130 IPR003613 GO:0004842|GO:0016567
Mupr3133g00001 442 CDD RING-Ubox_PUB 62 114 IPR045210 -
Mupr3133g00001 442 Gene3D - 335 434 IPR011989 -
Mupr3133g00001 442 Coils Coil 158 178 - -
Mupr3133g00001 442 ProSiteProfiles U-box domain profile. 60 134 IPR003613 GO:0004842|GO:0016567
Mupr3133g00001 442 SUPERFAMILY RING/U-box 50 133 - -
Mupr3133g00001 442 Gene3D - 188 334 IPR011989 -
Mupr3133g00001 442 FunFam RING-type E3 ubiquitin transferase 60 134 - -
Mupr3133g00001 442 SUPERFAMILY ARM repeat 154 432 IPR016024 -
Mupr3133g00001 442 FunFam RING-type E3 ubiquitin transferase 143 437 - -
Mupr3133g00001 442 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 134 IPR013083 -
Mupr3133g00001 442 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 194 238 IPR000225 GO:0005515
Mupr3133g00001 442 SMART Ubox_2 64 127 IPR003613 GO:0004842|GO:0016567
Mupr3133g00001 442 PANTHER U BOX DOMAIN-CONTAINING 25 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3133g00001 Mupr-Chr3133 5312 6714 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3133g00001 123 442 U-box Gene Family AT3G07360 58.537 1.74e-118 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3133g00001 - - gmx:100776534 701.434