Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3126g00008 ATGGCAGAAGTGGAACTAATCCCAGATTCACGTTTAGAACAACAAGTTGTAACATCTAAAACGAACCAACCAACCAAAACGGATAGTGTTTCATTTTTTGGCTTGTTTGCCACAGCTGATACTACTGACTATGTCTTAATGTTCCTCGGAAGTGTCGGTTCGTTTGTCCATGGTGCTGCTCTTCCTGTTTTCTTCATTTTGTTCGGTCGCATGATTGATTCTTTGGGACATCTTTCTAACAACCCTCACAAGTTGTCCTCACGAATTTCTCAGCATGCTTTGTATTTGCTCTATCTTGGAGGAGTTGTTCTGGTATCGGCTTGGATGGGTATATCTTATAACTTGGACCTCATTTCTTTCTTTCTAAGTAATGTCTTTGTTGGAAGATCAAGTGTTGCGTTCTGGATGCAAACAGGGGAAAGGCAAACGGCACGTTTGCGGTTGAAATATTTGCAGGCAGTGCTAAAGAAGGATATTAATTTCTTTGACAATGAAGCCAGGGATGCCAATATCATTTTCCACATCTCGAGTGACGCAATATTGGTACAAGATGCAATTGGTGACAAGATTATTGAGGCAAGTTTTGGGGGATGGATGACAGGCCATGCCATTCGTTACCTTTCTCAATTCATTGTCGGATTTGCCATTGGATTTACATCAGTGTGGCAGCTCACACTACTCACCTTGGCTGTGGTTCCATTGATAGCTGTAGCTGGGGGAGCTTATACAATAATTATGTCTACTTTATCAGAAAAGGGTGAAGCAGCTTATGCTGAAGCTGGGAAGGTTGCAGAAGAGGTAATTTCTCAAGTGCGTACTGTTTACTCCTTTGTCGGAGAAGAGAAAGCAGTTGGTTCATACTCAAAGTCTCTTGATAATGCTCTGAAGTTGGGGAAGAAGAGTGGTTTTGCAAAAGGAATCGGAGTAGGCTTCACATATGGGCTATTATTTTGTGCTTGGGCATTGCTTTTATGGTATTCTAGCATACTTGTGAGGCATCATAAAACAAATGGAGGCAAAGCGTTCACAACAATTATCAATGTCATCTTTAGTGGATTTGCTCTTGGTCAAGCTGCTCCAAACCTTGGTTCCATTGCTAAAGGGCGTGCAGCTGCAGCCAATATCATGAATATGATTGCGTCCTCTTCAAGCAATTCTAAAAGGTTGGATGATGGCATTGTTGTGCCACAAGTTGTTGGGGAAATTGAATTTTGTGAGGTCTGCTTTTCTTACCCCTCAAGATCCAATATGATCTTTGAAAATTTGGGCTTCTCAGTGAGTGCTGGGAAGACTATAGCAGTTGTTGGTCCAAGTGGTTCCGGAAAGAGCACAATTGTTTCACTTATTCAACGGTTCTATGACCCCACTTCAGGTAAGATCATGTTGGATGGATATGACCTAAAGAATCTTCAATTGAAATGGTTGAGAGAACAGATGGGCTTGGTTAGTCAAGAACCAGCACTATTTGCCACAACAATAGCTGGAAATATTTTATTTGGAAAAGAAGATGCAGACATGGATAAAGTCATACAAGCTGCCATGGCTGCAAACGCTCATTCTTTCATTCAAGGATTACCTGATGGCTATCAAACTCAGGTTGGAGAGGGTGGCACCCAACTTTCAGGGGGGCAAAAGCAAAGAATTGCCATAGCAAGAGCAGTGCTCAGAAACCCTAAAGTATTGCTTTTAGATGAGGCCACAAGTGCTCTAGATGCTGAATCAGAACTCATTGTCCAACAGGCATTAGAAAAAATAATGTCAAATAGAACAACAATAGTTGTTGCTCATCGATTGTCCACCATACGCGATGTAGACACAATTGTTGTGTTGAAGAATGGCCAGGTGGTTGAAAGTGGTACTCATTTGGAATTGATGTCCAACAATGGAGAGTATGTGAACCTGGTGAGTTTGCAGGCATCACAAAACCTCACAAGCTCTAGATCAATATCTCGCTCTGAGAGTTTAAGAAACTCTAGTTTTAGAGAACCTTTAGACAACCTCACCTTGGAGGAGCAATTGAAGTTGGATGCAACAGCAGAAGTGCAATCAAGGGATCAACACTTGCCATCAAAAACTACTTGTTCCACTCCATCAATTTTAGATTTACTGAAACTGAATGCTCCAGAGTGGCCCTATGCAATTCTTGGGTCAGTAGGTGCAGTTTTGGCAGGCATGGAAGCCCCTCTCTTTGCACTTGGAATCACTCACATTTTGACAGCATTTTATTCTCCTCAGGGTTCTAAAATCAAGCAAGAAGTTGATAGAGTTGCTCTTATATTTCTTGGAGTGGCTGTTGTTACTATACCTATTTATCTATTGCTACACTACTTTTGTACATTGATGGGAGAGCGCCTCACTGCCCGTGTGCGTTTGTTAATGTTCTCAGCTATTCTCAACAATGAAGTTGCATGGTTTGATAAGGATGAGCACAACACTGGCTCACTAACAGCCATGCTTGCTGCGGATGCAACATTAGTAAGAAGTGCTCTAGCTGACAGACTCTCAACCATTGTGCAAAATGTATCTCTCACTGTCACAGCTTTTGTTATTGGCTTCACATTGAGTTGGAAACTAACAGCAGTGGTTGTAGCCTGCCTTCCCCTTCTCATAGGAGCTTCTATCACTGAGCAACTATTTCTCAAGGGGTTTGGAGGAGATTATGGCCATGCTTACTCTAAAGCAACTTCTTTGGCTCGTGAAGCTATTGCAAACATACGAACCGTTGCTGCTTTTGGCGCAGAAGATCGAATCTCAATCCAGTTTGCATCTGAACTGAACAAGCCTAACAAACAAGCACTTCTAAGGGGCCACATATCAGGTTTTGGCTATGGCATAACACAGCTGTTGGCTTTCTGTTCCTATGCACTTGGCCTTTGGTATGCATCAGTTTTGATCAAGAATAAAGAGTCAAATTTTGGAGACATCATGAAGTCCTTCATGGTCTTAATCATCACTTCTCTGGCAATAGCAGAAACACTAGCTCTCACCCCAGACATTGTAAAGGGATCACAAGCACTTGGATCGGTTTTTGGCATACTCCAAAGGAGAACAGCCATCATCCCAGATGACCCCAACTCAAAGATGGTAACTGATGTCAAAGGAGAGATAGAGTTCAGAAATGTTTCCTTCAAGTACCCTATGAGACCTGATATCACCATATTTCAGAACTTAAACCTCAAAGTCTCAGCAGGTAAGAGTCTGGCAGTAGTGGGGCAAAGTGGTTCAGGAAAAAGCACAGTGATTGCCTTGGCAATGAGATTTTATGACCCCAATTCTGGGTCAGTCCTGATAGATGAATGTGACATCAGAAGCCTAAACCTGAGATCCTTAAGGCTGAGAATAGGATTGGTTCAGCAAGAGCCAGCTCTGTTCTCCACCACAGTTTATGAAAACATCAAGTATGGAAAAGAGGAGGCATCAGAAATAGAGGTGATGAAGGCAGCCAAAGCAGCAAATGCTCATGAATTCATCAGCAGAATGCCAGAAGGGTACAAAACTGAGGTTGGTGAGAGAGGAGTGCAGTTATCAGGAGGACAAAAACAAAGAGTGGCAATTGCTAGAGCTATTCTGAAAGATCCATCCATTCTTCTGTTGGATGAAGCGACTAGTGCACTTGACACGGTGTCAGAGAGGCTGGTCCAAGAGGCTCTTGACAAACTTATGGAAGGTAGAACAACAATTTTGGTAGCTCACAGGCTATCAACTGTTCGCGATGCAGACAGCATTGCAGTGCTGCAAAATGGGAAGGTTGCTGAACTGGGAAGCCATGAGAGGCTGATGGCCAAAGCTGGAAGCATCTACAAGCAACTGGTTAGTTTACAGCATTAA 3828 0.4271 MAEVELIPDSRLEQQVVTSKTNQPTKTDSVSFFGLFATADTTDYVLMFLGSVGSFVHGAALPVFFILFGRMIDSLGHLSNNPHKLSSRISQHALYLLYLGGVVLVSAWMGISYNLDLISFFLSNVFVGRSSVAFWMQTGERQTARLRLKYLQAVLKKDINFFDNEARDANIIFHISSDAILVQDAIGDKIIEASFGGWMTGHAIRYLSQFIVGFAIGFTSVWQLTLLTLAVVPLIAVAGGAYTIIMSTLSEKGEAAYAEAGKVAEEVISQVRTVYSFVGEEKAVGSYSKSLDNALKLGKKSGFAKGIGVGFTYGLLFCAWALLLWYSSILVRHHKTNGGKAFTTIINVIFSGFALGQAAPNLGSIAKGRAAAANIMNMIASSSSNSKRLDDGIVVPQVVGEIEFCEVCFSYPSRSNMIFENLGFSVSAGKTIAVVGPSGSGKSTIVSLIQRFYDPTSGKIMLDGYDLKNLQLKWLREQMGLVSQEPALFATTIAGNILFGKEDADMDKVIQAAMAANAHSFIQGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKVLLLDEATSALDAESELIVQQALEKIMSNRTTIVVAHRLSTIRDVDTIVVLKNGQVVESGTHLELMSNNGEYVNLVSLQASQNLTSSRSISRSESLRNSSFREPLDNLTLEEQLKLDATAEVQSRDQHLPSKTTCSTPSILDLLKLNAPEWPYAILGSVGAVLAGMEAPLFALGITHILTAFYSPQGSKIKQEVDRVALIFLGVAVVTIPIYLLLHYFCTLMGERLTARVRLLMFSAILNNEVAWFDKDEHNTGSLTAMLAADATLVRSALADRLSTIVQNVSLTVTAFVIGFTLSWKLTAVVVACLPLLIGASITEQLFLKGFGGDYGHAYSKATSLAREAIANIRTVAAFGAEDRISIQFASELNKPNKQALLRGHISGFGYGITQLLAFCSYALGLWYASVLIKNKESNFGDIMKSFMVLIITSLAIAETLALTPDIVKGSQALGSVFGILQRRTAIIPDDPNSKMVTDVKGEIEFRNVSFKYPMRPDITIFQNLNLKVSAGKSLAVVGQSGSGKSTVIALAMRFYDPNSGSVLIDECDIRSLNLRSLRLRIGLVQQEPALFSTTVYENIKYGKEEASEIEVMKAAKAANAHEFISRMPEGYKTEVGERGVQLSGGQKQRVAIARAILKDPSILLLDEATSALDTVSERLVQEALDKLMEGRTTILVAHRLSTVRDADSIAVLQNGKVAELGSHERLMAKAGSIYKQLVSLQH 1275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3126g00008 1275 CDD ABC_MTABC3_MDL1_MDL2 402 638 - -
Mupr3126g00008 1275 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1036 1272 IPR003439 GO:0005524
Mupr3126g00008 1275 ProSitePatterns ABC transporters family signature. 1175 1189 IPR017871 GO:0005524|GO:0016887
Mupr3126g00008 1275 SUPERFAMILY ABC transporter transmembrane region 702 1014 IPR036640 GO:0005524|GO:0016020
Mupr3126g00008 1275 Gene3D - 392 639 IPR027417 -
Mupr3126g00008 1275 SMART AAA_5 1063 1249 IPR003593 GO:0016887
Mupr3126g00008 1275 SMART AAA_5 428 614 IPR003593 GO:0016887
Mupr3126g00008 1275 PANTHER ABC TRANSPORTER B FAMILY 18 768 IPR039421 -
Mupr3126g00008 1275 ProSitePatterns ABC transporters family signature. 540 554 IPR017871 GO:0005524|GO:0016887
Mupr3126g00008 1275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 638 IPR027417 -
Mupr3126g00008 1275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1025 1274 IPR027417 -
Mupr3126g00008 1275 FunFam ABC transporter B family member 4 392 645 - -
Mupr3126g00008 1275 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 48 367 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr3126g00008 1275 Gene3D - 1034 1274 IPR027417 -
Mupr3126g00008 1275 SUPERFAMILY ABC transporter transmembrane region 41 375 IPR036640 GO:0005524|GO:0016020
Mupr3126g00008 1275 CDD ABC_6TM_Pgp_ABCB1_D2_like 703 1019 - -
Mupr3126g00008 1275 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 714 1001 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr3126g00008 1275 Gene3D ABC transporter type 1, transmembrane domain 34 652 IPR036640 GO:0005524|GO:0016020
Mupr3126g00008 1275 Pfam ABC transporter 420 568 IPR003439 GO:0005524
Mupr3126g00008 1275 CDD ABC_6TM_Pgp_ABCB1_D1_like 47 375 - -
Mupr3126g00008 1275 FunFam ABC transporter B family member 4 1026 1275 - -
Mupr3126g00008 1275 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 402 637 IPR003439 GO:0005524
Mupr3126g00008 1275 Pfam ABC transporter 1055 1203 IPR003439 GO:0005524
Mupr3126g00008 1275 CDD ABC_MTABC3_MDL1_MDL2 1036 1274 - -
Mupr3126g00008 1275 Gene3D ABC transporter type 1, transmembrane domain 663 874 IPR036640 GO:0005524|GO:0016020
Mupr3126g00008 1275 Gene3D ABC transporter type 1, transmembrane domain 890 1033 IPR036640 GO:0005524|GO:0016020
Mupr3126g00008 1275 Pfam ABC transporter transmembrane region 48 351 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr3126g00008 1275 Pfam ABC transporter transmembrane region 715 987 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3126g00008 Mupr-Chr3126 84147 89294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3126g00008 23 1275 Calmodulin-binding Proteins AT2G36910 49.297 0.0 1206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3126g00008 K05658 - gmx:100787093 2195.62