Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mupr3112g00010 | ATGGACTCGCTCCTCTTTGGAATAAAATCAAAGCCTGTTTATACAACTTCAAAAGTTGAGCAGTTAAGAGAATGTCTGAGGAATCTTAAGCGTAACCATCAGGGTGAGGATGCCAGAGTCAGAAGGGCCTTTCAAACACTACAAGTCTATGTTGGAAATGTTGCCAAGAATCCCAAGGAGGAAAAGTACAGGAAAATCCGACTGAAAAACCCATTATTCCAGGATAGAGTTGGAAGTCTAAATAGAGGTGTAGAGTTTCTTGAGCTCTGTGGTTTTGAGAGAACAGATGACTTCTTGTATCTTCCTCATGAAAAGGTTGACGTGGGGCTGCTAAATTCAGCTGGTTTTGTCTTGAATGCTGCGATGACAAATCCTTTCTTTGGAGTTTTAAGTACTACTCACAATTAG | 408 | 0.4069 | MDSLLFGIKSKPVYTTSKVEQLRECLRNLKRNHQGEDARVRRAFQTLQVYVGNVAKNPKEEKYRKIRLKNPLFQDRVGSLNRGVEFLELCGFERTDDFLYLPHEKVDVGLLNSAGFVLNAAMTNPFFGVLSTTHN | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mupr3112g00010 | 135 | PANTHER | F13M7.16 PROTEIN | 9 | 130 | - | - | |
| Mupr3112g00010 | 135 | SMART | PGNneu | 42 | 103 | - | - | |
| Mupr3112g00010 | 135 | SUPERFAMILY | PUG domain-like | 16 | 126 | IPR036339 | - | |
| Mupr3112g00010 | 135 | Pfam | PUB domain | 39 | 107 | IPR018997 | - | |
| Mupr3112g00010 | 135 | Coils | Coil | 19 | 39 | - | - | |
| Mupr3112g00010 | 135 | Gene3D | - | 23 | 121 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mupr3112g00010 | Mupr-Chr3112 | 22054 | 24283 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mupr3112g00010 | 12 | 130 | C2H2 Transcription Factor Family | AT1G04850 | 61.157 | 1.26e-51 | 164 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mupr3112g00010 | - | K24348 | gmx:100781260 | 225.328 |