Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3111g00003 ATGTGGAAAGGGAGAGCGTTACTGGTGATGATGGTGTTTCTAGTCCAGCAAATTTGTGCTACCAACGAGCAAGATCATGCTTGTCCCCCTTCTTCCTGTGGCAAACTCATTAACATAACGTATCCATTTCGATTAAGAGGTGACCCAGAACGCTGCGGCGACAAGAGGTACGAGCTTGCTTGTGAAAATAATGTTACTGTGTTATATTTGTACTCTGGAAAATACCATGTGCAGGCAATCAACTACAATAATTTCACAATCCGAGTGGTGGATCCCGGAGTTCAACAACCAAATTGCTCCTCCCTTCCTCGCTATTTCTTGTCTCGATCCAATTTCAGTGATACTTATGATTACACCATGGTTAATGACACGGATCCATACCAAGCCAGTCAAGAACGATTGTCTCAACCTCAACAAATCTTCAACAAAATCTCTTTCTCAGTGATTCAGGGGGAGCTTGTTTTCCAGCATATAGTTTTCTTGAATTGTAGCTATCCAGTGAGTGACAATAGTAAGTATGTGGATACTGCTTCCTGCGTCAATTGGCAGTCCAAAGGCTATATATATGCTATCGCTGGTGACTTAAAAGCAGAGGATATTGAAGTCGATTGTCATGTAAAGCTGGTTACTCCCACATCTTGGTGGGGTTTGGATACAAATAAATATTCCTACACTGCCATGTACAGGGCGCTAGTCTATGGATTTGAGATTTCATGGATGCATCTCGCCTGTGAGGATCGTTGTGGAAATTTCATGGATAGCTCCTGCAATTTCGACACTTCCGGACATCTCCAATGCTCGGTCCAGTGCCACTCCTTCCTGGGAATTTTCCATTTATGTGATGATATAGGGATATGGTACCAGCTGCAATTATATGCAAAAGGACTGCTTGAAATAATAAAAGGACAAAACCCCAATTATGAAGGTGTCTCCAACTATAAATTAGGATTAATCATAGGACATTACATTCTACCATCCTTTTTGGCAGGCAAATTTTTGTTTGGGGTGACATTATTTATTGCACTTTTGATATACAAATGGAAAAAACGACATTTGTCATTGTACGAAAATATTGAAAATTATCTGGAAGAAAACAACTTGATGCCTATTAGATATTCATACAAGGAAATTAAGAAGATGACCGCGGGTTTCAAAGACAAGTTGGGTGAAGGAGGATATGGCTCTGTGTTTAAGGGAAAGTTGCGTAGCGGGTCTTATGTGGCGATAAAAATGTTAGGTAAATCAAAAGGAAATGGACAAGATTTCATTAGTGAAATTGCAACTATTGGAAGAATACATCATCAGAATGTAGTACAATTAATTGGATTTTGTGTTGAGGGTTCCAAACAAGCTCTTGTCTATGAATACATGCCCAATGGGTCTCTTGATAAAATTATTTTTTCCAAAGATGGAAATATACATTTAAGCTATGACAAAATATATAATATATCAATTGGAGTGGCCCATGGGATTGCTTATCTCCATCATGGGTGTGAGATGCAAATTTTGCATTTTGATATCAAGCCGCACAACATCTTACTAGATGAAAAATTTACTCCAAAGGTCTCTGACTTCGGATTGGCAAAGCTATATCCAATAGATAATAGCATTGTCACAATGACAGCTGCAAGAGGGACAATTGGGTATATGGCTCCAGAATTGTTTTATAAAAATATTGGGAGAATATCCCATAAAGCTGATGTTTATAGTTTTGGAATGCTTTTGATGGAGATGGCAAACAAAAAGAGAAACCTAAATTCCCATGCAGAACATTCAAGCCAACTTTACTTTCCTTTATGGATTTATAACCATCTTCAACAAGAAAAAGACATAGAAATGGAAGATCTCACACATGAAGAAAAGAAAATAGCAAAGAAGATGATCATAGTTGCACTTTGGTGTATACAATTGAAACCAAATGAGCGCCCCTCAATGAGCAAAGTTGTCGAGATGCTTGAAGGAGACATTGAGAGCCTGGAAATACCTCCAAAGCCTACCCTATATCCACATGAAACGATGACTAAAGATCAAACAATCAACTCTAACCAATTAATATCAAGTGACTTTGATAGTTCTTCTGATTATTCCATGTAA 2094 0.3825 MWKGRALLVMMVFLVQQICATNEQDHACPPSSCGKLINITYPFRLRGDPERCGDKRYELACENNVTVLYLYSGKYHVQAINYNNFTIRVVDPGVQQPNCSSLPRYFLSRSNFSDTYDYTMVNDTDPYQASQERLSQPQQIFNKISFSVIQGELVFQHIVFLNCSYPVSDNSKYVDTASCVNWQSKGYIYAIAGDLKAEDIEVDCHVKLVTPTSWWGLDTNKYSYTAMYRALVYGFEISWMHLACEDRCGNFMDSSCNFDTSGHLQCSVQCHSFLGIFHLCDDIGIWYQLQLYAKGLLEIIKGQNPNYEGVSNYKLGLIIGHYILPSFLAGKFLFGVTLFIALLIYKWKKRHLSLYENIENYLEENNLMPIRYSYKEIKKMTAGFKDKLGEGGYGSVFKGKLRSGSYVAIKMLGKSKGNGQDFISEIATIGRIHHQNVVQLIGFCVEGSKQALVYEYMPNGSLDKIIFSKDGNIHLSYDKIYNISIGVAHGIAYLHHGCEMQILHFDIKPHNILLDEKFTPKVSDFGLAKLYPIDNSIVTMTAARGTIGYMAPELFYKNIGRISHKADVYSFGMLLMEMANKKRNLNSHAEHSSQLYFPLWIYNHLQQEKDIEMEDLTHEEKKIAKKMIIVALWCIQLKPNERPSMSKVVEMLEGDIESLEIPPKPTLYPHETMTKDQTINSNQLISSDFDSSSDYSM 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3111g00003 697 SMART serkin_6 382 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3111g00003 697 ProSiteProfiles Protein kinase domain profile. 382 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3111g00003 697 Pfam Wall-associated receptor kinase galacturonan-binding 28 91 IPR025287 GO:0030247
Mupr3111g00003 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Mupr3111g00003 697 Pfam Protein kinase domain 385 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3111g00003 697 PANTHER RUST RESISTANCE KINASE LR10-RELATED 355 673 IPR045874 GO:0004672
Mupr3111g00003 697 FunFam serine/threonine-protein kinase PBS1-like 352 456 - -
Mupr3111g00003 697 FunFam PR5-like receptor kinase 457 664 - -
Mupr3111g00003 697 CDD STKc_IRAK 388 654 - -
Mupr3111g00003 697 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524
Mupr3111g00003 697 MobiDBLite consensus disorder prediction 674 697 - -
Mupr3111g00003 697 SUPERFAMILY Protein kinase-like (PK-like) 367 653 IPR011009 -
Mupr3111g00003 697 Gene3D Transferase(Phosphotransferase) domain 1 457 661 - -
Mupr3111g00003 697 Gene3D Phosphorylase Kinase; domain 1 356 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3111g00003 Mupr-Chr3111 15065 20925 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3111g00003 8 668 Receptor kinase-like Gene Family AT5G38260 33.673 8.57e-112 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mupr3111g00003 Pkinase 5.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3111g00003 - - gmx:100305367 989.949