Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3111g00001 ATGAAAAGGAGAGGAATAGCTATCACCATTCTTCTACTTCTACGCACTTGTATTGCATCGTTCATCCACCACGATTGTCCTGCTTCTTCCTGCGGGAGCATTCCCAACATAAGTTATCCCTTTCGACTCAGAGGTGATCCACTTCACTGCGGCGACAAGAGGTACGAACTAGATTGTGAGAACAACGCCACAGTTTTGACTCTGTTTTCAGGGAAATACCATGTACAAGAAATCGATTACAAGAGATACAAAATCAGAGTGTGTGATGAGGGCGTTGTGGAGGATGCCACTTCCGCCTTCAAGCCCCACTATTTCTTGGGATCTGGCAATTTCAGTAACGTCTTTATGGGTCCTGGAATGGATCCGCTACACTTGGACCAATTTCAAGCTTCAATAGCATATTTCAACTGTGACGGTGCAATCACCGATGATCCTAGATATGTTTCTGTGGGCCCCACTGATTGTGCCTCCGGAGGGCACCTCTATGCTGTTGTTAGAGATTCCAGAAATAATTTTAGTGCGACAGACATCAAGGTTGGGTGTCAACTGCAACGGGCTACTTTTGCAAATTGGGGAAAAGTCCAAGACCACAACCCCAACAAAAATGGTTCCTACACTGATATCCACGACATGCTTTTACATGGATTTGGGCTCTCTTGGATACATATCGATGCGGAGTGGGGAAGTTTTGCCTTCTTGTCAATGAATCCACCGGTGAAATCCAGTGTGGCGAGGAACACTGTCGTTATGCCTACCAGGGGAACAATGTCACCTACTTTTGCAAAAGAAATAATGATCAAAACAACCATAATTAATTTTGGGATCCATGCAGGATTGACGAAAACGTTTGTCTTGAATAAAGCTACAGGATATGATGGAATTGTTATTGAAATAGGAAAAGACACAGGAAGGTATGCTATAATTAGATTTCTATTTGGTGTGGTAGCTTTCATTACATTGTTGATCCATAAATGGAGAAAAAGGCATACATCAAACTATGAACATATTGAAGATTTTCTTCGAGGAAACACCTTCATGCCAATAAGATACTCATACAAAGACATAAAGAACATGACCAGGGGTTTTAAGGAAAAGTTAGGTCAAGGAGGATATGGATTGGTATATAAAGGAAAGTTACGTAGTGGGTCATTTGTAGCGATAAAGATGTTACGTAAATCAAATGCTAATGGGCAAGAATTCATGAGTGAAGTCGCAACTATTGGAAGAATACACCATAGCAATGTGGTACGACTTATTGGATTTTGTGTTGAGGCATCAAATTGTGCTCTTGTTTATGAATTTATGTCTAATGGCTCTCTTGATAATTTTATTTTCTCCAAGAATATTAGTATCTCTTTAACTTATGAGCAAATATATGAGATATCTCTTGGAGTGGCGCGTGGAATTGCTTATTTACATGAAGGTTGTGACATGCAAATTTTACATTTTGATATCAAGCCACATAACATTCTTCTTGATGAGAATTTTGTGCCAAAGGTGTCCGACTTTGGCCTAGCAAAGCTCTATCCTCTAGACAAAAGTATTGTTACTTTGACAGCGGCAAAGGGAACAATTGGTTACATGGCCCCTGAGTTATTCTACCATAATATTGGAGGATTATCATACAAGGCAGAC 1635 0.4031 MKRRGIAITILLLLRTCIASFIHHDCPASSCGSIPNISYPFRLRGDPLHCGDKRYELDCENNATVLTLFSGKYHVQEIDYKRYKIRVCDEGVVEDATSAFKPHYFLGSGNFSNVFMGPGMDPLHLDQFQASIAYFNCDGAITDDPRYVSVGPTDCASGGHLYAVVRDSRNNFSATDIKVGCQLQRATFANWGKVQDHNPNKNGSYTDIHDMLLHGFGLSWIHIDAEWGSFAFLSMNPPVKSSVARNTVVMPTRGTMSPTFAKEIMIKTTIINFGIHAGLTKTFVLNKATGYDGIVIEIGKDTGRYAIIRFLFGVVAFITLLIHKWRKRHTSNYEHIEDFLRGNTFMPIRYSYKDIKNMTRGFKEKLGQGGYGLVYKGKLRSGSFVAIKMLRKSNANGQEFMSEVATIGRIHHSNVVRLIGFCVEASNCALVYEFMSNGSLDNFIFSKNISISLTYEQIYEISLGVARGIAYLHEGCDMQILHFDIKPHNILLDENFVPKVSDFGLAKLYPLDKSIVTLTAAKGTIGYMAPELFYHNIGGLSYKAD 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3111g00001 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Mupr3111g00001 545 FunFam Os07g0541700 protein 435 524 - -
Mupr3111g00001 545 Gene3D Phosphorylase Kinase; domain 1 338 434 - -
Mupr3111g00001 545 PANTHER RUST RESISTANCE KINASE LR10-RELATED 333 545 IPR045874 GO:0004672
Mupr3111g00001 545 Gene3D Transferase(Phosphotransferase) domain 1 435 545 - -
Mupr3111g00001 545 Pfam Wall-associated receptor kinase galacturonan-binding 26 89 IPR025287 GO:0030247
Mupr3111g00001 545 SUPERFAMILY Protein kinase-like (PK-like) 345 545 IPR011009 -
Mupr3111g00001 545 SMART serkin_6 360 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3111g00001 545 FunFam serine/threonine-protein kinase PBS1-like 328 434 - -
Mupr3111g00001 545 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Mupr3111g00001 545 ProSiteProfiles Protein kinase domain profile. 360 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3111g00001 545 Pfam Protein kinase domain 363 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3111g00001 Mupr-Chr3111 27 3384 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3111g00001 27 545 Receptor kinase-like Gene Family AT1G66910 32.781 1.14e-68 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mupr3111g00001 Pkinase 8.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3111g00001 - - gmx:100820366 534.258