Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3110g00009 ATGAATTTGTTTTGGCTTGTTTGTTGTGTGTCGGTGGTGTCGTGTTTGGGAGTATCGGTATCGTCAAGACCCGGCGTTGTGAACATTGGAGCAATCTTCAACATCGATTCCATTATTGGAAAAGTGGCTAAAATTGCGTTGGAGGAAGCGGTGAAGGATGTAAACGCCAACACTAGCATTCTTCATGGAACTAAACTTGTTCTCACGATGCAAAATTCCAATTCCAGTGGTTTTATAGGCATGGTTCAAGCTTTGCGGTTTATGGAGAGTGATGTGGTTGCTATAATAGGGCCACAATCTTCTGTGGTTGCCCACATAATATCCCATGTTGCAAATGAACTCAAGGTTCCTCTATTGTCATTTGCCGCAACAGACCCCACCCTCTCATCGCTTCAGTTCCCTTTCTTTGTGAGGACAACACAGAGTGATTTATACCAAATGAGGGCAGTTGCTGAAACCATTGATTATTATGGTTGGAAGGAGGTGATTGCCATATATGTGGATGATGATTATGGACGAAATGGTGTGGCTGCATTGGATGATGAACTAGCTGCCAGGCGTTGTAGAATCTCCTTCAAGGAAGGGATTAAATCCGGAGCTGAAGTTGACCGCGGAGAAATTACAAGTTTGCTTGTCAAAGTGGCATTGATGCAATCTAGGGTCATTGTTCTCCATGCACAAGCTGATTATGGATTTACGGTTTTCAATGTGGCGCGTTATCTTGGGATGACAGACAATGGCTATGTGTGGATAGCCACGGACTGGCTCTCTAATCTTCTGGATTCTTCTTCTCTCCCTTCAGAGACAATGGATGTTCTCCAAGGAGTGCTTGTTTTGCGCCAGCATACACCTGATTCTGATAGAAAAAGGGCATTTATCTCTAGGTGGAACAAGTTAACTGGTGGCTCTTTGAGGTTACATTCTTATGGCCTATACGCTTATGATTCTGTTTGGATGGTTGCACGTGCTCTTGATGCATTTTTCAGTCAGGGTGGGGTTCTTTCGTCTACCAATTACAAAAGTTTAACTGGTGATAAGGAAGGTGATCTTAACCTTGATGCAATGAGCATTTTTGACAATGGAACGCTTCTGTTGAAGAACATACTGCAGAGTGATTTTGTTGGATTATCAGGTAGAATGAAATTTGAACCAGACCGGTCTCTCGTTCATCCAGCCTATGACATCCTTAATGTGGTTGGAACTGGTCTTAGGAAGGTTGGTTACTGGTCCAACTATTCTGGTTTGTCAATTGTGTCTCCTGAGATATTGTATGCAAAGCCAGCTAATAGATCAAGTGCAAACCAGAAGCTTTACAGTGTGATATGGCCTGGAGAAACAGTATCTAAACCCCGTGGATGGGTCTTCCCAAATAATGGTAGACAATTGAGAATTGGTGTGCCTATCCGAGTCAGTTACCGTGCATTTGTATCACCGGTGAAGGGAACAGAGTCGTTTAAAGGTTTCTGCGTTGATGTATTCACAGCAGCTGTAAACTTGTTGCCTTATGCTGTTCCATACCGTTTTGTCCCATTTGGAGATGGCCGCCAAAATCCAAGCTACACACAACTTGTCAACTTAATCAAAACTGGTTACATTTCCTTGCTCCAGTTCTTTGATGGTGCCATTGGTGACATTGCTATTGTCACAAATCGGACAAGGATTGTAGATTTTACACAGCCTTATGCTGCATCTGGACTCGTTGTGGTGGCCCCTTTCAAGAAAACCAATTCTGGCGGTTGGTCTTTCCTGCGGCCATTTACTCCTCTTATGTGGACTGTGACTGCTTGTTTCTTCCTTTTCATTGGGCTAGTAATATGGATTCTGGAACACAGGATAAATGATGAGTTCAGGGGTCCACCTAGACAGCAAATTATAACCCTGTTATGTTACATTTGTTTGGTGGAAGGACACAGAGAAGCTGGAGAGAATACCGCGAGTTCTCTTGGTCGGTTGGTGATGCTCATATGGTTATTTGTGGTTTTGATCCTCACTTCCAGCTACACTGCAAGCTTAACATCCATACTCACAGTGCAGAAGTTATCTTCTCCTATCAATGGAATAGATAGCTTAAGAGCTAGTGATGAACCTATAGGGTTCCAAGTCGGTTCATTTGCAGAATATTACTTGGCTCAAGATCTTGGAATATCCAAATCTAGGCTTGTTGCCCTTGGATCTCCAGAAGAATATACTAAGGCCCTCCAGCTAGGTCCTAAAAAAAAAGGAGGTGTTGCTGCTATTGTTGATGAACGACCCTATGTTGAAATCTTCTTATCATCTCAGTGCACATTCAGGATTATAGGGCAGGAGTTCACCAGAAGTGGCTGGGGTTTTGCATTCCCTAGGGACTCCCCTTTGGCTGTGGATATGTCAACTGCCATTCTGCAACTTTCTGAAACGGGTGATCTACAGCGGATTCATGATAAGTGGATGACACAAAGCTCTTGTAGTTTAGACAATGCTGAAATTGATTCAGATCGTCTTCAGCTTAAAAGCTTCTGGGGTCTCTTCCTCATTTGCGGGATAGCTTGCTTCATTGCTCTTGTCTTGCATTTTTTGCAGCTTATGTTACAGTCATGGCATTCTCCTCCTTCAGAACCTGCTTCTAGTGCTAGCTCAATTACTGGTCGTTTTCAAAGATTTCTTACACTCATTGACGAGAAGGAAGACCCATCAGGGAGTAAAGGAAGAAAGAGGAATGGAGCCGAAACATCGCTTGAAGATCAACTGGAAAGGAAGCCAAAGAGGGATATATCTAGGAAATTTTCCGGGGAAGGTCACACGATTTACAAGACTGAAAACAACGGGGAGTCATTGGATATAAAGTGGTGGTTAGTTGTTGTGTTCAAGACGAATTGA 2856 0.4324 MNLFWLVCCVSVVSCLGVSVSSRPGVVNIGAIFNIDSIIGKVAKIALEEAVKDVNANTSILHGTKLVLTMQNSNSSGFIGMVQALRFMESDVVAIIGPQSSVVAHIISHVANELKVPLLSFAATDPTLSSLQFPFFVRTTQSDLYQMRAVAETIDYYGWKEVIAIYVDDDYGRNGVAALDDELAARRCRISFKEGIKSGAEVDRGEITSLLVKVALMQSRVIVLHAQADYGFTVFNVARYLGMTDNGYVWIATDWLSNLLDSSSLPSETMDVLQGVLVLRQHTPDSDRKRAFISRWNKLTGGSLRLHSYGLYAYDSVWMVARALDAFFSQGGVLSSTNYKSLTGDKEGDLNLDAMSIFDNGTLLLKNILQSDFVGLSGRMKFEPDRSLVHPAYDILNVVGTGLRKVGYWSNYSGLSIVSPEILYAKPANRSSANQKLYSVIWPGETVSKPRGWVFPNNGRQLRIGVPIRVSYRAFVSPVKGTESFKGFCVDVFTAAVNLLPYAVPYRFVPFGDGRQNPSYTQLVNLIKTGYISLLQFFDGAIGDIAIVTNRTRIVDFTQPYAASGLVVVAPFKKTNSGGWSFLRPFTPLMWTVTACFFLFIGLVIWILEHRINDEFRGPPRQQIITLLCYICLVEGHREAGENTASSLGRLVMLIWLFVVLILTSSYTASLTSILTVQKLSSPINGIDSLRASDEPIGFQVGSFAEYYLAQDLGISKSRLVALGSPEEYTKALQLGPKKKGGVAAIVDERPYVEIFLSSQCTFRIIGQEFTRSGWGFAFPRDSPLAVDMSTAILQLSETGDLQRIHDKWMTQSSCSLDNAEIDSDRLQLKSFWGLFLICGIACFIALVLHFLQLMLQSWHSPPSEPASSASSITGRFQRFLTLIDEKEDPSGSKGRKRNGAETSLEDQLERKPKRDISRKFSGEGHTIYKTENNGESLDIKWWLVVVFKTN 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3110g00009 951 Gene3D - 142 415 - -
Mupr3110g00009 951 SMART GluR_14 463 812 IPR001320 GO:0015276|GO:0016020
Mupr3110g00009 951 SUPERFAMILY Periplasmic binding protein-like I 22 418 IPR028082 -
Mupr3110g00009 951 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 27 871 IPR015683 -
Mupr3110g00009 951 PIRSF IGluLR_plant 1 940 IPR017103 -
Mupr3110g00009 951 Gene3D - 738 775 - -
Mupr3110g00009 951 CDD PBP1_GABAb_receptor_plant 28 418 IPR044440 -
Mupr3110g00009 951 Gene3D - 578 709 - -
Mupr3110g00009 951 MobiDBLite consensus disorder prediction 887 916 - -
Mupr3110g00009 951 Pfam Receptor family ligand binding region 45 400 IPR001828 -
Mupr3110g00009 951 SUPERFAMILY Periplasmic binding protein-like II 438 813 - -
Mupr3110g00009 951 FunFam Glutamate receptor 142 297 - -
Mupr3110g00009 951 FunFam Glutamate receptor 457 578 - -
Mupr3110g00009 951 FunFam Glutamate receptor 579 710 - -
Mupr3110g00009 951 Pfam Bacterial extracellular solute-binding proteins, family 3 484 811 IPR001638 -
Mupr3110g00009 951 FunFam Glutamate receptor 706 814 - -
Mupr3110g00009 951 CDD GluR_Plant 460 809 - -
Mupr3110g00009 951 Gene3D - 45 390 - -
Mupr3110g00009 951 Gene3D - 457 577 - -
Mupr3110g00009 951 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 40 56 - -
Mupr3110g00009 951 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 100 128 - -
Mupr3110g00009 951 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 313 325 - -
Mupr3110g00009 951 Pfam Ligand-gated ion channel 812 843 IPR001320 GO:0015276|GO:0016020
Mupr3110g00009 951 Gene3D - 776 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3110g00009 Mupr-Chr3110 78105 82328 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3110g00009 21 901 Ion Channels AT1G42540 64.246 0.0 1210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3110g00009 K05387 - gmx:102661260 1551.57