Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3110g00002 ATGAGGCTAAATCGCGCAGTAAACTACGGTCCTTTAAGGTTTGACCTGGTGTCTGTGCTAAATGCAATTGTTGGTGCGAAGGACAAAGGCATAGGAGAAATGGAGGCAGAGCATCATCACGAGACCTCTAACGGTATTGGAGGCTTGTACGTGAAAGTTATGACTGACGACCAATTGGAACTTCTGAGGCAACAGATATCTGTCTACGCCACCATCTGCGAACAGCTTGTTGAGATGCACAAATCCGTAACTACCCAACAGGACCTCGCAGGACTGAGGCTGGGTAATTTGTACTGTGATCCTTTGATGGCCTGCTCTGGCCACAAGATAAGTGCGAGGCAGCGCTGGACTCCAACGCCTCTGCAGCTTCAAATACTTGAACGTATTTTTGATGAGGGAAATGGCACTCCTACCAAACAGAAGATTAAAGATATAACCATTGAACTTGGCCAACATGGCCAAATATCAGAGACAAATGTTTATAACTGGTTCCAGAATAGACGAGCTCGTTCAAAGCGGAAGCAACTCGCTCCTGCACCCATTGTTGGGGACCCCGAACCTGACACAGAACTTGACTCTCCAAAAGAGAAAAAGACACGTGAAGACACCTTTCAACTTCAACCCTATGACAATTCATCCCCTCATAGGATGAAGGATATGTACATCCAGAGTCCTGACATAGGATTTGAGCAATTGATGGGTAAAATTGAAGTTGCAGAAGTACGGTATCACATGGAGCAGTATGAGTAA 750 0.4573 MRLNRAVNYGPLRFDLVSVLNAIVGAKDKGIGEMEAEHHHETSNGIGGLYVKVMTDDQLELLRQQISVYATICEQLVEMHKSVTTQQDLAGLRLGNLYCDPLMACSGHKISARQRWTPTPLQLQILERIFDEGNGTPTKQKIKDITIELGQHGQISETNVYNWFQNRRARSKRKQLAPAPIVGDPEPDTELDSPKEKKTREDTFQLQPYDNSSPHRMKDMYIQSPDIGFEQLMGKIEVAEVRYHMEQYE 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3110g00002 249 MobiDBLite consensus disorder prediction 188 204 - -
Mupr3110g00002 249 Gene3D - 114 177 - -
Mupr3110g00002 249 PANTHER WUSCHEL-RELATED HOMEOBOX 13 37 232 IPR044559 GO:0003700
Mupr3110g00002 249 ProSiteProfiles 'Homeobox' domain profile. 109 174 IPR001356 GO:0003677
Mupr3110g00002 249 MobiDBLite consensus disorder prediction 171 217 - -
Mupr3110g00002 249 Pfam Homeodomain 113 173 IPR001356 GO:0003677
Mupr3110g00002 249 CDD homeodomain 113 175 IPR001356 GO:0003677
Mupr3110g00002 249 SMART HOX_1 111 178 IPR001356 GO:0003677
Mupr3110g00002 249 SUPERFAMILY Homeodomain-like 112 175 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3110g00002 Mupr-Chr3110 20651 22266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3110g00002 49 248 Wox Gene Family AT4G35550 52.586 4.19e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mupr3110g00002 Homeodomain 2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3110g00002 - - var:108342525 367.081