Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr30g00009 CCAACTCCTTCTCCACTTCACCACCAACACCAACATCAACATCAACATCAACACCAACACCACCATCACCAACCCATTTCAGCAGAACAGCATTCCAACCTCCCCTTGCCTTCTCCAGCATCTCTCAGCGTTGGCCTTGGCATTTTCCCTCTCCTAACAGTGCCACACACCAATGATGTCCATGTTCAACTCCAAGACTGTGCCAACACCAACACCAACTATTGGAATCTCAAGATGTGTGGCTCAGAGGTGAATTCAACAAGAAAAAGTGTGATGAACGTGGAAGATGAGGGGAGCAACAAGCACATAATGGAAAGTGAGGAAAGTGGAGGCGAGTTTAGGGTGTGCCAGGATTGTGGCAACAGGGCCAAGAGAGATTGCAGCTTCAGAAGGTGCAGGACTTGCTGCAAGGGACGTGGCTTTGATTGCACCACTCACGTTAGGAGCACGTGGGTTCCAGCAGCTCTAAGACGTGGTAATGGTAATGGTAATAGTAGTGGTTGTGAAGACGAACAACATGCTAATTCTAAGAGGCTAAAAACTCTAGTGTCATCAAAAAATATTGTTTCTGCTACCTCTCATAGTTCCACTTCCAATGCTACCCCAACAAAAAGCTTTAGCTTGGATACCACCTCTTGTCAACAAGATGCTGGTTTCAAGCAGTCTTTGCCACGGCATGTTTGTGCTCCTGCTGTGTTTAGGTGCCATAGAGTGTCTGCTATTGGGAGTGGTGAAGATGAGTTTGCCTACTTGGCCACAGTGCATATTAGTGGGCATGTGTTCAAGGGGTTTCTTTATGATCATGGTGCTGATCATGCCAGAAATGATGTGCCTAGTGTTTCAGAACTGCAATTGGGAAACAATGGAAGTGGAAAGAGTAATAGGGAATGTTCTGCTGCAATTGGTGTTCCAACTAGTGCCTACCCTGCTTCTGTTTGCTGA 942 0.466 PTPSPLHHQHQHQHQHQHQHHHHQPISAEQHSNLPLPSPASLSVGLGIFPLLTVPHTNDVHVQLQDCANTNTNYWNLKMCGSEVNSTRKSVMNVEDEGSNKHIMESEESGGEFRVCQDCGNRAKRDCSFRRCRTCCKGRGFDCTTHVRSTWVPAALRRGNGNGNSSGCEDEQHANSKRLKTLVSSKNIVSATSHSSTSNATPTKSFSLDTTSCQQDAGFKQSLPRHVCAPAVFRCHRVSAIGSGEDEFAYLATVHISGHVFKGFLYDHGADHARNDVPSVSELQLGNNGSGKSNRECSAAIGVPTSAYPASVC 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr30g00009 313 MobiDBLite consensus disorder prediction 1 38 - -
Mupr30g00009 313 NCBIfam LRP1 C-terminal domain 223 269 IPR006511 -
Mupr30g00009 313 NCBIfam putative zinc finger domain, LRP1 type 115 156 IPR006510 -
Mupr30g00009 313 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 12 296 IPR007818 GO:0003700|GO:0006355
Mupr30g00009 313 Pfam Domain of unknown function (DUF702) 115 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr30g00009 Mupr-Chr30 92072 93665 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr30g00009 116 304 C2H2 Transcription Factor Family AT5G12330 46.939 4.09e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mupr30g00009 DUF702 4e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr30g00009 - - gmx:100777812 478.789