Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3096g00003 ATGAAGAGCGCAACCATGAGGGAACCTCAGAATCCTTCAATACATTCTCCAGCGTTAGACAGCACGCCTCAACCACTGCCACCTCCCAAAAAGAAACGAAACCTCCCTGGAATGCCAGATCCAGATGCCGAGGTGATTGCTTTATCACCGAAGACGCTGTTGGCGACGAACCGTTTCGTGTGCGAGATCTGCAACAAGGGGTTCCAGCGCGACCAGAACCTGCAGCTTCACCGCCGTGGCCACAACTTGCCGTGGAAGCTGCGGCAGCGAGGGACCAATGAACCACGCAAGAAAGCCTACGTGTGCCCCGAGCCTTCCTGCGTCCACCACAACCCCGCCAGGGCGCTCGGCGACCTCACCGGTATCAAGAAGCACTTCTGCAGAAAACACGGCGAGAAAAAGTGGAAATGCGAACGCTGCTCTAAGAAATACGCCGTACAATCCGATTGGAAGGCGCATATGAAGACTTGCGGCACTAGAGAGTACCGATGCGACTGTGGCACCTTGTTCTCTAGAAGGGATAGTTTCATTACGCACAGAGCATTTTGCGATGTCTTGGCACAAGAGAGCGCCAGGGCCCAGGCTCAGGTCCAGGTCCAGGTCCAGGTCCAAGCCCAGGCCCAAGGTGTTGTGGCTTCTTCGCCGCCTACGCCTCCACTTACTCCCACTGCCTCCGTCGTGTCTCCAACCTTGTCCATTCAGAGCTCAGAAATTCCGGAAAAACCAAGGAAGGCATCGCCGACATCTTCTAACGCAACGTGTTTGGCGAACGTGGTAGCGACAAGCAGCACGCGGTCTAGTTCCACTGGTTGCAGCAGTAGTGTTTTTGCAAGTGTGTTGGCATCATCGTCCACAGGGGCAACTCCTTCACAATCCCAATCACCATCAACTTCGTCATTCTCAAACCTCATTTCACGCTTGGCTCGCACGGATTATCCCAATAATATGAGAGAACCCACATCCCTATCCCTCTCCACACCACTCTATCTCTCCAACAACGACCCTCCCCACTACACCGCATCTCCCCAACAACCTGCACTATCTGCCACTGCATTACTCCAAAAGGCTGCTCAAATGGGTTCATCCAACGCCTCCTTGCTTCGTGGTTTAGGCTTAGCAACAACATCATCATCATCATCCTTTGTGAAGCAAGAGAATCACCCTGTGGTGGATAGCCTTGGGCTTGGGCTTCCCTGTGGGAGTGGGGATGTCACGGACGCCATGATGGGCTCTTCTCCCTCATTTGTGGGCCAGCCCATGACCCGTGATCTTCTTGGTCTCAGCATCGGTGGCGGAGCAAGCAGGGGTGGTCTCTCTGCTTTGCTTACCTCATTCGGAGGGAACTTTGATTCGTCCGCCGAGGGAGGAGTTCCCCCGTAG 1380 0.5457 MKSATMREPQNPSIHSPALDSTPQPLPPPKKKRNLPGMPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRGTNEPRKKAYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGTREYRCDCGTLFSRRDSFITHRAFCDVLAQESARAQAQVQVQVQVQAQAQGVVASSPPTPPLTPTASVVSPTLSIQSSEIPEKPRKASPTSSNATCLANVVATSSTRSSSTGCSSSVFASVLASSSTGATPSQSQSPSTSSFSNLISRLARTDYPNNMREPTSLSLSTPLYLSNNDPPHYTASPQQPALSATALLQKAAQMGSSNASLLRGLGLATTSSSSSFVKQENHPVVDSLGLGLPCGSGDVTDAMMGSSPSFVGQPMTRDLLGLSIGGGASRGGLSALLTSFGGNFDSSAEGGVPP 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3096g00003 459 MobiDBLite consensus disorder prediction 211 250 - -
Mupr3096g00003 459 MobiDBLite consensus disorder prediction 1 20 - -
Mupr3096g00003 459 SUPERFAMILY beta-beta-alpha zinc fingers 58 156 IPR036236 -
Mupr3096g00003 459 ProSiteProfiles Zinc finger C2H2 type domain profile. 59 81 IPR013087 -
Mupr3096g00003 459 MobiDBLite consensus disorder prediction 311 344 - -
Mupr3096g00003 459 Pfam Zinc-finger of C2H2 type 59 81 - -
Mupr3096g00003 459 Gene3D Classic Zinc Finger 113 194 - -
Mupr3096g00003 459 MobiDBLite consensus disorder prediction 224 250 - -
Mupr3096g00003 459 Gene3D Classic Zinc Finger 39 105 - -
Mupr3096g00003 459 MobiDBLite consensus disorder prediction 1 43 - -
Mupr3096g00003 459 ProSitePatterns Zinc finger C2H2 type domain signature. 61 81 IPR013087 -
Mupr3096g00003 459 FunFam protein indeterminate-domain 12-like 38 106 - -
Mupr3096g00003 459 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 16 432 IPR031140 -
Mupr3096g00003 459 FunFam protein indeterminate-domain 5, chloroplastic-like 113 192 - -
Mupr3096g00003 459 SMART c2h2final6 59 81 IPR013087 -
Mupr3096g00003 459 SMART c2h2final6 135 155 IPR013087 -
Mupr3096g00003 459 SMART c2h2final6 100 130 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3096g00003 Mupr-Chr3096 25555 28165 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3096g00003 30 444 IDZ Gene Family AT5G66730 52.903 2.67e-140 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr3096g00003 zf-met 0.0032 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3096g00003 K25869 - gmx:100800089 585.874