Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr308g00001 ATGATTGCCAAGTTCAAACAGAGCCTAGTACCTCTCCTACTCTGCACCCTTGTGATCACCGTTACAGAAACCTCGGCATCGGTGTTCAATAACGTTAGCTGCACAAGCAACAAGACTTTCACTCCAAACAGCACCTTCAACACCAACCTCAACGCTCTCCTCTCTTCCCTTTCCGCCAACGTAACCAACAACGTTAGGTTCTTCAACGCAACCTCAGGGGAACATTTGGACACCGTATACGGCCTCTACATGTGCCGCGGAGACGTGCCGTTTGCTCTGTGCAGAGAGTGTGTGGGCTTCGCGACGCAAACAATAGCCTCGTCGTGTCCCACATCGAAAGAAGCTGTGATTTGGTACAACGAGTGTTTATTGCGCTACTCTTATAGGTTATTCTTTTCTAAAATGGAAGAGTGGCCAAGGTACCAGATAAAGATCCCGTTGGGGGATCCAGTGGTTTTACACAGTAGTGGATTTTACACTGCGTTAGGATCCATTTTCGATGAACTACCAAATGGAGCAGCACTGGCTCTCAGCGAGTCTAATCTATTTGCAGTTAAGCAAGAAAACGCCTCTGCCAGTGTGACCCTGTATGGTTTCGCTCAGTGTACGCCGGACTTGTCCGCTGGCGACTGCAAACGGTGTGTCGCCGATGCGGCGGCGGAACTCACCAAGTCCTGTTGCGGAGGGAGCATAGGGGCGAGTGTTCTGTTTCCCAGTTGCATTGTTCGGTATGAAACGTATCCTTTTTATCAGCATTCTGGATCCTCCGCGCCAACACTGATCAAGGGTGAAGGAAATATTGGAACTGGAGTGATTGCTACCATTATTGTCCTGGTTATCGTTTTGGTCATGATTTTTTGCTTTGGCTACGGTTTCATCCGGATAAGAGCGAGAAAGAAACGCAAGGCCATTGGACCAGAAATCACTGTCTTGCAGTCCCTGGAGTTTGATTTGGCTACAATTGAAGTAGCAACAAATAAGTTTTCTGAAGAACGCAGGATCGGCAAAGGGGGTTACGGAGAAGTCTACAAGGGAATCCTTCCTAACAAAGAAGAAATAGCTGTGAAGAGATTGTCAACAAATTCTAAGCAAGGAGTAGAGGAATTCAAAAATGAAGTTCTTGGCTATATGTCTCCTGAATATGCAATGCATGGACAATTTTCAGAAAAATCTGATGTATTCAGTTTTGGAGTCATGGTTCTTGAGATTATTAGTGGAAAGAAGAATTCTTGTTCTTTTGAATCATGTCGTGTTGATGACCTTCTAAGTTATGCATGGAATAAATGGAGGGATGAATCACCATTTGAATTGCTGGATCCAATTCTGCTAGAATCTTATAGTCCAAACGAAGTTGAGAAGTGTATGCAGATTGGATTATTGTGTGTGCAAGAAAATCCAGATGACAGGCCTGCAATGGGAACCATTGTTTCAAATCTTAGCAACCCTTCAGTTGAAATGCCATTCCCTCTAGAACCAGCATTTTTCATGCATGGCAGAATGAGAAGACATTCAGCTGAACATGAATCATCTTCAGGTTACTCCACCAATCATTCTTTTACGTCCTCTGTAAATAAGATGTCTACGACTATTTTCTTCCCTCGATAG 1605 0.4455 MIAKFKQSLVPLLLCTLVITVTETSASVFNNVSCTSNKTFTPNSTFNTNLNALLSSLSANVTNNVRFFNATSGEHLDTVYGLYMCRGDVPFALCRECVGFATQTIASSCPTSKEAVIWYNECLLRYSYRLFFSKMEEWPRYQIKIPLGDPVVLHSSGFYTALGSIFDELPNGAALALSESNLFAVKQENASASVTLYGFAQCTPDLSAGDCKRCVADAAAELTKSCCGGSIGASVLFPSCIVRYETYPFYQHSGSSAPTLIKGEGNIGTGVIATIIVLVIVLVMIFCFGYGFIRIRARKKRKAIGPEITVLQSLEFDLATIEVATNKFSEERRIGKGGYGEVYKGILPNKEEIAVKRLSTNSKQGVEEFKNEVLGYMSPEYAMHGQFSEKSDVFSFGVMVLEIISGKKNSCSFESCRVDDLLSYAWNKWRDESPFELLDPILLESYSPNEVEKCMQIGLLCVQENPDDRPAMGTIVSNLSNPSVEMPFPLEPAFFMHGRMRRHSAEHESSSGYSTNHSFTSSVNKMSTTIFFPR 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr308g00001 534 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Mupr308g00001 534 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 374 530 - -
Mupr308g00001 534 SMART tyrkin_6 328 479 IPR020635 GO:0004713|GO:0006468
Mupr308g00001 534 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 131 - -
Mupr308g00001 534 Pfam Protein tyrosine and serine/threonine kinase 375 479 IPR001245 GO:0004672|GO:0006468
Mupr308g00001 534 Gene3D Phosphorylase Kinase; domain 1 292 374 - -
Mupr308g00001 534 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Mupr308g00001 534 FunFam Putative cysteine-rich receptor-like protein kinase 9 151 249 - -
Mupr308g00001 534 Gene3D - 27 131 IPR038408 -
Mupr308g00001 534 Gene3D - 151 249 IPR038408 -
Mupr308g00001 534 SUPERFAMILY Protein kinase-like (PK-like) 316 478 IPR011009 -
Mupr308g00001 534 Pfam Salt stress response/antifungal 34 127 IPR002902 -
Mupr308g00001 534 Pfam Salt stress response/antifungal 156 247 IPR002902 -
Mupr308g00001 534 Gene3D Transferase(Phosphotransferase) domain 1 375 489 - -
Mupr308g00001 534 ProSiteProfiles Gnk2-homologous domain profile. 140 249 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr308g00001 Mupr-Chr308 2356 5821 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr308g00001 354 534 Receptor kinase-like Gene Family AT4G05200 41.398 7.16e-38 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr308g00001 PK_Tyr_Ser-Thr 1.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr308g00001 - - gmx:100791642 591.652