Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3086g00002 ATGATTGTGGTGCGAAAACCCTATTGGGGGTTGCTTCTCTTTCTGCTCCACCTTCACTGCAGCACCTGCTACGCCACCGAACCCATGAACTGTACGGACACAGGCCGAGTTTGCACTTCATTCATAGCCTTCAAGCCGGAGGCGAACCACACACTGGCTCTGATTCAGAGCATGTTTGATGTGTTGCCTGGTGACATCACCGTTGAAGGCAACGGCTGGGGTTACGTGTTTATAAGGAAGAACTGTTCTTGTGCTGCTGGCATCAACAAGTACGTGTCTAACACCACCTTTACCGTGAAATCCAATGAGGGGTTGGTTTATGACATGGTCATGGATGCCTATGATGGCCTTGCTTTCCTTCCCAACACCACAAGGAGGGCCAGGAATGGTGCTGTTGTGTCGCTGAGGTTGTTCTGTGGCTGCTCCAGTGGACTGTGGAACTATCTGGTCAGTTATGTGATGAGAGATGGGGATAGCGTTGAGTCCTTGGCAAGCAGGTTTGGGGTTAGTATGGATAGCATTGAGAGTGTCAATGGCATTAGTAATCCGGATAATGTCACTGTTGGTTCACTTTATTATATACCACTGGATTCTGTTCCTGGTGATCCTTATCCCCTGAATAATGCTGCTCCACCAGTTCCTGTTCCTTCCCCGTCCTTCGATAATTTTTCAGCTGATCAAGTCAATCATAAGGCTCATGTACCCTACGGATGGATCATTGGGGGTTTAGGAGTTGGGCTTGTTCTAATAATATTGACTGTGATTCTCTGTGTTTGTCTGAGATCATCAAATTGTTTTGCTGATGCCAGAACTCATGAGAAAGATGCTGAGGGCAAGATCTCTCATAAATTTCATATTCTTCGCAACCCAAGTTTTTTTTGTGGTTCTGGAAGGTACATATGTGGTAAACATGTTGACCAGAAGCAAACAGATGGTGAATCCAGCAATCACACGATTACCATTCCCAAAGCTTCAACTCTAGGGCCTGACGTATTTGACATGGATAAGCCTGTAGTTTTTACATACGAAGAGATTTTTTCCTCAACTGATGGTTTCTCTGATTCAAATCTACTTGGGCATGGAACATACGGTTCTGTTTATTATAGCCTCCTTCGTGACCAGGAAGTTGCTATTAAAAGAATGACAGCTACTAAAACAAAAGAATTTATGTCAGAGATGAAAGTTTTGTGCAAGGTTCATCATGCTAATCTGGTAGAATTGATTGGCTATGCAGCTAGTCATGAGGAGCTTTTCCTAGTTTATGAATATGCTCAGAAGGGTGCACTCAGAAGCCATTTGCACGATCCTCAAAATAAGGGTCATTCTCCACTTTCTTGGATCATGAGGGTCCAGATTGCACTTGATGCTGCTAGGGGCCTTGAGTACATACATGAGCACACAAAAACTCACTATGTCCACCGGGATATCAAGACAAGTAACATTTTACTTGATGCTTCCTTTAGAGCAAAGATTTCAGATTTTGGGTTAGCAAAGCTTGTTGGGAAAGCAAATGAGGGAGAAATTTCAACTACCAAAGTTGTTGGTACATATGGATATCTTGCTCCAGAATATTTGAGTGACGGTCTTGCAACAACTAAAAGTGATGTCTATGCATTCGGTGTCGTCCTCTTTGAGACCATATCAGGAAAGGAGGCCATAATTCAATCGGAAGGTACAACGACAAAAAATCCTGAAAGACGTTCACTGGCATCCATAATGCTGGCAGTTCTTAGGAACTCACCTGATTCCATGAGCATGTCAAGCTTGAGAGAATATATTGATCCAAATATGATGGATCTGTATCCCCATGATTGTTTGGCCATGCTGGCAAAGCAATGTGTGGACGAGGACCCCATCTTGCGACCTGATATGAGACAAGTTGTGATTTCCCTCTCACAGATTCTCCTGTCTTCTGTTGAGTGGGAAGCAACTCTAGCTGGGAATAGCCAG 1950 0.44 MIVVRKPYWGLLLFLLHLHCSTCYATEPMNCTDTGRVCTSFIAFKPEANHTLALIQSMFDVLPGDITVEGNGWGYVFIRKNCSCAAGINKYVSNTTFTVKSNEGLVYDMVMDAYDGLAFLPNTTRRARNGAVVSLRLFCGCSSGLWNYLVSYVMRDGDSVESLASRFGVSMDSIESVNGISNPDNVTVGSLYYIPLDSVPGDPYPLNNAAPPVPVPSPSFDNFSADQVNHKAHVPYGWIIGGLGVGLVLIILTVILCVCLRSSNCFADARTHEKDAEGKISHKFHILRNPSFFCGSGRYICGKHVDQKQTDGESSNHTITIPKASTLGPDVFDMDKPVVFTYEEIFSSTDGFSDSNLLGHGTYGSVYYSLLRDQEVAIKRMTATKTKEFMSEMKVLCKVHHANLVELIGYAASHEELFLVYEYAQKGALRSHLHDPQNKGHSPLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDASFRAKISDFGLAKLVGKANEGEISTTKVVGTYGYLAPEYLSDGLATTKSDVYAFGVVLFETISGKEAIIQSEGTTTKNPERRSLASIMLAVLRNSPDSMSMSSLREYIDPNMMDLYPHDCLAMLAKQCVDEDPILRPDMRQVVISLSQILLSSVEWEATLAGNSQ 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3086g00002 650 Gene3D Phosphorylase Kinase; domain 1 328 423 - -
Mupr3086g00002 650 SMART serkin_6 352 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3086g00002 650 Gene3D Transferase(Phosphotransferase) domain 1 425 644 - -
Mupr3086g00002 650 Pfam LysM domain 152 189 IPR018392 -
Mupr3086g00002 650 SUPERFAMILY LysM domain 150 195 IPR036779 -
Mupr3086g00002 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Mupr3086g00002 650 SUPERFAMILY Protein kinase-like (PK-like) 331 631 IPR011009 -
Mupr3086g00002 650 Gene3D LysM domain 147 200 IPR036779 -
Mupr3086g00002 650 ProSiteProfiles Protein kinase domain profile. 352 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3086g00002 650 SMART LysM_2 151 195 IPR018392 -
Mupr3086g00002 650 FunFam Kinase family protein 327 423 - -
Mupr3086g00002 650 ProSitePatterns Protein kinases ATP-binding region signature. 358 379 IPR017441 GO:0005524
Mupr3086g00002 650 Pfam Protein tyrosine and serine/threonine kinase 356 629 IPR001245 GO:0004672|GO:0006468
Mupr3086g00002 650 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 75 650 IPR044812 GO:0019199|GO:0045087
Mupr3086g00002 650 FunFam PTI1-like tyrosine-protein kinase 3 424 645 - -
Mupr3086g00002 650 ProSiteProfiles LysM domain profile. 150 194 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3086g00002 Mupr-Chr3086 12710 18549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3086g00002 27 650 Receptor kinase-like Gene Family AT1G51940 69.449 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mupr3086g00002 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3086g00002 - - gmx:100796989 1196.42