Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3073g00007 ATGAATGAAAGGACCGCTTTATTTCATTGTCTCCTTCTCACAACAAACCCCCCACACCTTCTTCTTCTTCTTCTTCTCTGCAACTCTCTCTCTCCTCGCTTTCTCTCTCATCTTCCGCCTTTGAGATCGTTACTCAAACGGCGTCGTCTCCTCTCCGATTCCCGAGCCACGCTTATCAGGTTTCTTGGTGCTGTTGGTGTATTGTACATTGTTATTTCTGCATTTGCTGATGGTGTTGTAGGTCCTTTCCAATCTTGGATTAATGGGGTGACTATAGGACTGATGAGTGACGACCTTGGCATTTTCTGTTTTCTCAGGATACTAGAAGGTGCTCTTTCTGTATCAGTGGATAGAGACATGGGTAAATGGCTTCAAACTGTCTATTTTGACACCCAGAGATTGCAAGTGATAGTTATGGGACATAGGCACTTATATAACACATCTCCATTGTTTGAGGGTGAGCCTGACCAGAACTGGAATCATATGCATACTGATCAACATTATGTGCACCTTGGTAGGACTAGCACTTCAGAGAATGGTTCTTTTATTTATCCTGCAGAAAATATGTCCGTAGATGGCATTTCTTTCCCTTCTCATTGGAACTCTTCCACAAGGTCAAATGGATACGCATCCTCTAGTCACAACATTGATGTACCTCCTCACCAGTCAGATGCATCAGGCTCCTCTAATGATCATTTTGTGCATCCGTCTAGTGCTGGAGCATTCTATGCAGTGTCTGAAAATTATGTACACCAGCCTTCTTCTTCCAATTATGACAGACAATTTCATGTTGATGGTGGTTTTATTGATCTTACAATGGGAAGTGGACAAGGGCCTCACAAGCGTAAGAGCCCTGGAATTCCTTCAGTATACGAGAGAGGCAGTACAAGTAGATACTTTAATGCTGGGAGTTCAACTGATATTCCTATATCTTCAGAGTTATGGCAGGAGAAGCCAAATATTGATTCTCAATATATGCCCTGGGATCATTTTACTATGACACCCACATTCAGAGGTAATGGCCTTTCAATAAAGGGTGAGGATTCTTTGCGGAATGTGAGGAGCCGTTCTGCACTTGATTTGGATTCCAACCTGGCCAGGACCCATTTATCAAGTAATCATTCACACAACTCCTACCCTACTGCCCCACCAGTTGACCATTCTAGCATGGTGGATCTTTCTGGTCAGACTAATGCTACATCGACAAGGGATTGGAGCCAAATGAACATATCTCCAGCTAATGGAAGGGTGATATTATCAGATACAAGTGCTTTTGGTCTTGAGACAAGTCACTTCCTTGTTGGAAGTGGTTCTACTGCAAGCAATGCTTCTGTAGATATTGGGGGCTTCCATCAAGAATTTGGTACAAGCAGAAATCCTACTGCTCCTCAAGGTTTTCATAATAATCAAACTCAGGCTGCTAGGGGAATTCGAAGCAATTATTCTCAGAGATCCACCCCAACTTTTAGGGCTTCTTCAAGCTTGCGCTTGGGACATGTGACATCTTTGGATGATGGATTGCCTATGGTTGCTGAAAGTTACACTTCTAGACATCCAAGGCCATTGAGCACCGTTGGCTGGCGGAATGGTGATAGAAATGGGAGGTCAAGAATCTCTGGTGAAAGATATCGATCGTTAACTGAGGAGAGTGGTCTACATGATCGATTTTCCTCTGAGGGTTTCATGGTTGTTGAGCGGGCATCACTATATGGTTCCAGGAATATGCTTGATCAGCACCGAGAAATGAGGATGGACATAGATAGCATGAGTTATGAGGAACTACTTGCACTTGGTGAGAGGATTGGCTATGTAAACACAGGAGTGTCTGAGGATTTGCTTTCCAAATGTTTAACGGAAACAATATATTGTTCGTCTGAGCAAAGTCAAGACGAAGGAAACTGTGTTATATGTCTGGAAGAGTACAAGAACATGGACGATGTTGGAACACTTAAAACTTGTGGACATGACTACCATGTGAGCTGCATTAAAAAGTGGTTATCTATGAAGAAATTATGTCCTATCTGCAAGGCATCTTCTTTGCCTGAGGATACGAAGGATAAATAA 2064 0.4288 MNERTALFHCLLLTTNPPHLLLLLLLCNSLSPRFLSHLPPLRSLLKRRRLLSDSRATLIRFLGAVGVLYIVISAFADGVVGPFQSWINGVTIGLMSDDLGIFCFLRILEGALSVSVDRDMGKWLQTVYFDTQRLQVIVMGHRHLYNTSPLFEGEPDQNWNHMHTDQHYVHLGRTSTSENGSFIYPAENMSVDGISFPSHWNSSTRSNGYASSSHNIDVPPHQSDASGSSNDHFVHPSSAGAFYAVSENYVHQPSSSNYDRQFHVDGGFIDLTMGSGQGPHKRKSPGIPSVYERGSTSRYFNAGSSTDIPISSELWQEKPNIDSQYMPWDHFTMTPTFRGNGLSIKGEDSLRNVRSRSALDLDSNLARTHLSSNHSHNSYPTAPPVDHSSMVDLSGQTNATSTRDWSQMNISPANGRVILSDTSAFGLETSHFLVGSGSTASNASVDIGGFHQEFGTSRNPTAPQGFHNNQTQAARGIRSNYSQRSTPTFRASSSLRLGHVTSLDDGLPMVAESYTSRHPRPLSTVGWRNGDRNGRSRISGERYRSLTEESGLHDRFSSEGFMVVERASLYGSRNMLDQHREMRMDIDSMSYEELLALGERIGYVNTGVSEDLLSKCLTETIYCSSEQSQDEGNCVICLEEYKNMDDVGTLKTCGHDYHVSCIKKWLSMKKLCPICKASSLPEDTKDK 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3073g00007 687 FunFam E3 ubiquitin-protein ligase MBR2 isoform A 599 680 - -
Mupr3073g00007 687 ProSiteProfiles Zinc finger RING-type profile. 634 676 IPR001841 -
Mupr3073g00007 687 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 218 679 IPR045191 GO:0061630
Mupr3073g00007 687 MobiDBLite consensus disorder prediction 207 231 - -
Mupr3073g00007 687 SMART ring_2 634 675 IPR001841 -
Mupr3073g00007 687 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 601 680 IPR013083 -
Mupr3073g00007 687 SUPERFAMILY RING/U-box 624 680 - -
Mupr3073g00007 687 CDD RING-H2_RNF24-like 634 678 - -
Mupr3073g00007 687 Pfam Ring finger domain 633 676 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3073g00007 Mupr-Chr3073 51025 59924 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3073g00007 139 686 C3H Transcription Factor Family AT2G37150 43.964 6.77e-126 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3073g00007 - - gmx:100803627 1037.71