Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3073g00006 ATGAGTGTCATCGACATCCTCACCAGAGTTGACTCCATTTGTAAAAAGTACGACAAATACGACGTCGAAAAGCAGAGGGATTCCAATATCTCCGCCGACGATGCATTCGCCAAACACTACGCCGCCGTCGACGCCGACATCGAGGCCTTACTTCAGAAAGCAGAAACCGCTTCGAAGGAGAAAAGTAAGGCATCTACTGTAGCGATCAATGCCGAGATTCGTCGAACCAAGGCGAGGTTGTTGGAGGAAGTTCCCAAGTTGCAGAGATTGGCTATGAAAAAGGTAAAGGGGCTTTCATCACAAGAATTTGCTGCCCGTAATGATTTGGTTCTTGCATTGCCGGAGAGGATTCAAGCTATCCCAGATGGGACCCCTGCAGCACCCAAACAAACTGGAGGTTGGGCAGCTTCTGCCTCACGTCCTGCAATTAAATTTGATTCAGATGGGCAATTTGATGATGGATACTTCCAACAAACTGAAGAATCAAGTGGATTCAGGAAGGAATATGAAATGCGTAAAATGAAACAGGCAAGTTTGGATATGATTGCAGAAGGATTGGATACTTTGAAAAACATGGCTCATGATATGAATGAGGAACTGGATAGACAAGTTCCTCTGATGGATGAGATTGATACTAAGGTGGACAGGGCATCTTCTGACCTTAAAAATACCAATGTTAGACTTAGAGACACAGTGAACCAGCTTCGATCCAGTCGAAACTTTTGTATTGATATTGTTTTGTTGATTATAATTTTGGGAATTGCTGCCTATTTGTACAATGTGCTAAAGAAATGA 795 0.434 MSVIDILTRVDSICKKYDKYDVEKQRDSNISADDAFAKHYAAVDADIEALLQKAETASKEKSKASTVAINAEIRRTKARLLEEVPKLQRLAMKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWAASASRPAIKFDSDGQFDDGYFQQTEESSGFRKEYEMRKMKQASLDMIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDRASSDLKNTNVRLRDTVNQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3073g00006 264 SMART tSNARE_6 164 231 IPR000727 -
Mupr3073g00006 264 Gene3D - 177 240 - -
Mupr3073g00006 264 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 169 231 IPR000727 -
Mupr3073g00006 264 Pfam SNARE domain 206 255 IPR000727 -
Mupr3073g00006 264 PANTHER SYNTAXIN 43 251 IPR045242 -
Mupr3073g00006 264 FunFam Putative syntaxin-71-like 170 230 - -
Mupr3073g00006 264 CDD SNARE_Qc 179 229 - -
Mupr3073g00006 264 ProSitePatterns Syntaxin / epimorphin family signature. 175 214 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mupr3073g00006 264 Coils Coil 40 60 - -
Mupr3073g00006 264 SUPERFAMILY SNARE fusion complex 176 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3073g00006 Mupr-Chr3073 35651 39632 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3073g00006 1 263 SNARE and Associated Proteins AT3G09740 76.692 1.06e-150 419