Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3073g00005 ATGGACAAAGATGCTAATTCAGAAATCCAACTCCCTCCTGGATTTAGATTCCACCCTTCTGATGAGGAGCTAATTGTTCACTATCTGAGAAAAAAAGTGACATCATCGCCCCTTCCTGCTTCATTCATAGCCGAAATAGATCTTTACAAGTATAATCCATGGGAGCTCCCAAGCAAAGCTTTGTTTGGGGAGGATGAATGGTATTTCTTTACTCCTAGGGACAGGAAGTATCCCAATGGAGTGAGGCCTAATAGAGCAGCTGCTTCTGGTTATTGGAAGGCTACTGGGACTGACAAACCCATTTTTACTTCATGTGGGATGAAGAGCATTGGAGTGAAGAAGGCCCTTGTGTTCTACCAGGGTCGTCCTCCAAAAGGATCTAAAACCGACTGGATCATGCACGAGTATAGGTTGCATGATTCCATGATCTCCAATTCAAAGCAAAGAGGGTCCATGAGACTGGATGAGTGGGTGCTGTGCCGGGTTCGACAGAAAGCTAGCAGCCCAAGAAGCATTCGGGAAGACTCAAATAAACTTGTTTATGAACCAACAAACCACTTTCAACAAATGAATGAGAACTCAAATCCTGAACCAGTGAAAAACTCTGTGCATAATGAATATCCAATGTTACCTTATATTCTGGCTTCTAAGAGTGCTCTGCCTAATTCTCTTGGCGTGGCCTCAAGCTCGGGGTTTGGTTGTAATGATGATGTAAAAGCATATGCTTCATTGCATGATGACAACTTAAATGTAATAATAGGAGCGCAGTTCATGGAACCTGTAGGTGAGGGCTTGTTTAATCCATTGAAGACAAAACACATTGAAGAAAATGTGTTGGACTTGTATGCTCCCCTCAATAAAAAACTAAGCGAAGAAGTTGATGTTGGGAAACAAAGACTTGAGAAAGAGATAAACAAAGGTTACACTTTCAATAACTTCGAGCAGTGGACTTCCATCATACAACCCCAAGAGCTTAATAGCTTAGCCTTTACGAAATATACATGA 1005 0.4189 MDKDANSEIQLPPGFRFHPSDEELIVHYLRKKVTSSPLPASFIAEIDLYKYNPWELPSKALFGEDEWYFFTPRDRKYPNGVRPNRAAASGYWKATGTDKPIFTSCGMKSIGVKKALVFYQGRPPKGSKTDWIMHEYRLHDSMISNSKQRGSMRLDEWVLCRVRQKASSPRSIREDSNKLVYEPTNHFQQMNENSNPEPVKNSVHNEYPMLPYILASKSALPNSLGVASSSGFGCNDDVKAYASLHDDNLNVIIGAQFMEPVGEGLFNPLKTKHIEENVLDLYAPLNKKLSEEVDVGKQRLEKEINKGYTFNNFEQWTSIIQPQELNSLAFTKYT 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3073g00005 334 Coils Coil 286 306 - -
Mupr3073g00005 334 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Mupr3073g00005 334 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 204 - -
Mupr3073g00005 334 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
Mupr3073g00005 334 Gene3D NAC domain 20 171 IPR036093 GO:0003677|GO:0006355
Mupr3073g00005 334 FunFam NAC transcription factor 20 168 - -
Mupr3073g00005 334 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3073g00005 Mupr-Chr3073 32492 33887 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3073g00005 10 174 NAC Transcription Factor Family AT1G61110 69.942 3.25e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr3073g00005 NAM 6.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3073g00005 - - gmx:100788799 612.068