Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3071g00006 ATGTATTGGGGAGTTATGGCAGGAAACATGGGGTGGGGTATAATAGAAGAGGAGGGATGGAGGAAGGGACCTTGGACTGCTGAAGAGGACAGATTGCTCATTCAGTATGTCAAGTTGCATGGTGAAGGCAGATGGAACTCTGTTTCTAGGCTTGCAGGACTGAAAAGAAATGGAAAGAGCTGCAGGTTGAGATGGGTGAATTACCTGAGGCCAGACCTCAAGAAGGGTCAGATAACTCCACAAGAAGAAAGCATCATTCAAGAGCTGCATGCTAGGTGGGGAAACAGGTGGTCAACAATTGCAAGAAGCTTGCCAGGAAGAACTGACAATGAGATTAAGAATTATTGGAGGACCCATTTCAAGAAAAAGGCTAAACCCCCCTCTGATGCTGCTGAGAAGGCCAAGATTCGTTCCTCAAGGAGGCAGCAATTTCAACAGCAACAACTGCAGTTGAAGCAGCAGCAGGTTCAGCAACAGCAGCAGCAACAATTCCAATTCAACTTAGACGTGGAAGGGATCATAAGCTTGCTTGAGGAAAATGACCATAGAGTTCCTTCTATATCTCAAGAGACACATGAAATGGTTAACATGTACCAAAACACTTCAGAACAGCAGAGTTATTTGTACTCTATGTTCAATGTCAATGACAATGTCTCTGCACCAAACGAAGAAATTCTGTGGGATGGGCTGTGGAACTTGGACGATATAGTGCCACAAGCAAAGCTAGTTTACACAGCTTAG 741 0.448 MYWGVMAGNMGWGIIEEEGWRKGPWTAEEDRLLIQYVKLHGEGRWNSVSRLAGLKRNGKSCRLRWVNYLRPDLKKGQITPQEESIIQELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKPPSDAAEKAKIRSSRRQQFQQQQLQLKQQQVQQQQQQQFQFNLDVEGIISLLEENDHRVPSISQETHEMVNMYQNTSEQQSYLYSMFNVNDNVSAPNEEILWDGLWNLDDIVPQAKLVYTA 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3071g00006 246 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Mupr3071g00006 246 SUPERFAMILY Homeodomain-like 19 116 IPR009057 -
Mupr3071g00006 246 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Mupr3071g00006 246 Pfam Myb-like DNA-binding domain 75 119 IPR001005 -
Mupr3071g00006 246 CDD SANT 24 69 IPR001005 -
Mupr3071g00006 246 FunFam MYB-related transcription factor 79 123 - -
Mupr3071g00006 246 FunFam Myb transcription factor 22 74 - -
Mupr3071g00006 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
Mupr3071g00006 246 Gene3D - 22 74 - -
Mupr3071g00006 246 Gene3D - 79 123 - -
Mupr3071g00006 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 73 IPR017930 -
Mupr3071g00006 246 CDD SANT 79 120 IPR001005 -
Mupr3071g00006 246 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 17 213 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mupr3071g00006 246 Coils Coil 142 162 - -
Mupr3071g00006 246 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Mupr3071g00006 246 SMART sant 21 71 IPR001005 -
Mupr3071g00006 246 SMART sant 74 122 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3071g00006 Mupr-Chr3071 45507 46603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3071g00006 17 236 MYB Transcription Factor Family AT4G13480 60.345 9.42e-81 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr3071g00006 Myb_DNA-binding 1.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3071g00006 K09422 - gmx:100813935 395.201