Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3071g00002 ATGGAGCAGGAAGAGCATGAAGTGTACGGTGCAGACATTCCCGACGAGGAGGTTGATATGGACGCAGACGCTGAACAAGACGAGCAACTTCCCCCCAATCACACAAGCAAGGAATTGGAGGACATGAAGAAGAGGCTGAAGGAGATCGAGGAAGAAGCTAGCGCCCTGCGCGAAATGCAGGCCAAGGTGGAGAAAGAGATGGGCGCTGTTCAAGATTCGTCTGGTCCTTCTGCAACTCAAGCTGAAAAGGAGGAAGTGGATGCTCGGTCAATCTATGTCGGCAATGTTGACTATGCGTGCACGCCTGAAGAAGTTCAACAGCATTTTCAGTCCTGTGGAACTGTGAACCGGGTGACAATACTGACAGACAAATTTGGTCAACCCAAAGGGTTTGCTTATGTAGAGTTTGTTGAGATTGATGCTGTTCAGAATGCTCTTCTGTTAAATGAATCAGAATTGCACGGTCGACAACTGAAGGTGTCTGCCAAGCGTACAAATGTACCTGGAATGAAGCAGTATTATGGAAGAAGACCTACTGGTTTCCGATCTAGGAGGCCTTTCATGCCTGCTCCGTTCTTTCCACCATATGGTTATGGATACAAGGCGTTGCACTTGGCACTCAAGTCAAGGTTTACTCATACAGTGATGGAGGCAACTATGCAGCGAAAAATTTCAATAGAATTATAA 687 0.4702 MEQEEHEVYGADIPDEEVDMDADAEQDEQLPPNHTSKELEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDSSGPSATQAEKEEVDARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYYGRRPTGFRSRRPFMPAPFFPPYGYGYKALHLALKSRFTHTVMEATMQRKISIEL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3071g00002 228 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 22 188 - -
Mupr3071g00002 228 MobiDBLite consensus disorder prediction 1 85 - -
Mupr3071g00002 228 MobiDBLite consensus disorder prediction 1 26 - -
Mupr3071g00002 228 CDD RRM_II_PABPs 90 161 - -
Mupr3071g00002 228 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 91 159 IPR000504 GO:0003723
Mupr3071g00002 228 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 89 165 IPR000504 GO:0003723
Mupr3071g00002 228 Coils Coil 36 66 - -
Mupr3071g00002 228 SUPERFAMILY RNA-binding domain, RBD 77 186 IPR035979 GO:0003676
Mupr3071g00002 228 Gene3D - 11 171 IPR012677 -
Mupr3071g00002 228 SMART rrm1_1 90 161 IPR000504 GO:0003723
Mupr3071g00002 228 MobiDBLite consensus disorder prediction 27 65 - -
Mupr3071g00002 228 FunFam Polyadenylate-binding protein 1 83 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3071g00002 Mupr-Chr3071 8080 14178 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3071g00002 90 161 Eukaryotic Initiation Factors Gene Family AT2G36660 38.158 7.21e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3071g00002 K14396 - gmx:100527139 364.77