Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3064g00002 ATGGCAAGGAAGAGAAGGGTTTCTGAAGCAGTTGAAGAGGGGAATCCATCTGAGGCAACCATGGCATGGGATGAGGTGATGAAGGAAGCTGCTGCACTAGGAAGTGCCACTGCCAGGAGACTAAGGAAGAGATTTGTTGGGGTGAGACAAAGGCCATCAGGAAGATGGGTGGCTGAGATAAAAGATACCATTCAGAAGATAAGGGTGTGGTTAGGCACTTTTGATACAGCAGAAGAGGCTGCAAGAGCCTATGATGAAGCTGCTTGCATTCTTCGTGGTGCCAACACTAGAACAAACTTCTGGCCTAGTTCTCAATCTTCCTTAACTCCTGCTCTTCCCTCAAAGATTACCAATCTCCTCATTCAAAGGCTTAAAGCAAGGAATAACAATAACAACTCTTGCTCTCTTTCTTCATCTTCTTCCTCCTCCACTTCTCTTTTCATCAACCAACAACAAATGCAACAAGAAGATGCATGTGGAACTGGGTCAACTTATTTCTCAATGAACCAATTCAAAGATTTCCTTAATGACCCTGAAGATTACAGCACAAGCAACAATGAGTTTAGTAATGATGGTGCACAAATTGATCACATCACAAGTAGTCTTGAATCATGTTTGAATGAAAAAGATGATGCCAAGGAAAAGGAAATTGAAATGGAGTTTGATTTCAGCAGTGTGACACAAACATCAAGTGGTGATATGAATTCAGGAGGGGAAAGAGAGGAAGACAGTAAAGAAGGCACTGATTTGAGTCCCCAGGATTTTCAGTTCCTGGACAATGTTGTTCCATCCAGTTATTATTATTCACCTTTTGAGATTGCTGAAGAGATTGAGGAGGAACTGGAGCCAGAGAACTATGGTGATGAGCCTTCCATGCTAAGAGAAGTCATGAAGAGAATGAAATATGAGAGGAAGTTTTCAGCTTCCCTTTATGCCTTCAATGGAATACCTGAGTGCTTGAAGTTGAAACTTGAATCAGGAAACATAAATGGAAGAGGGATTTCTGATCAACTAACCAACCTCAAGATGGCTTGTAGCAAAAACAAAATTGAGGCTAATAAGAAGAATGAAGAATACATTGAAGCAATGGATAGGAGAGAGGAAGAAAAGCCACAAACATCAATTGGCATGGATTGCTCTTCCCACTCTTTTTCATCCAGTATTGATGATGGAGAACTGTTACTTTGGAATTCACTCGATCTTCCTACCATTTGCTTTGTTAACTAG 1227 0.4108 MARKRRVSEAVEEGNPSEATMAWDEVMKEAAALGSATARRLRKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACILRGANTRTNFWPSSQSSLTPALPSKITNLLIQRLKARNNNNNSCSLSSSSSSSTSLFINQQQMQQEDACGTGSTYFSMNQFKDFLNDPEDYSTSNNEFSNDGAQIDHITSSLESCLNEKDDAKEKEIEMEFDFSSVTQTSSGDMNSGGEREEDSKEGTDLSPQDFQFLDNVVPSSYYYSPFEIAEEIEEELEPENYGDEPSMLREVMKRMKYERKFSASLYAFNGIPECLKLKLESGNINGRGISDQLTNLKMACSKNKIEANKKNEEYIEAMDRREEEKPQTSIGMDCSSHSFSSSIDDGELLLWNSLDLPTICFVN 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3064g00002 408 ProSiteProfiles AP2/ERF domain profile. 44 101 IPR001471 GO:0003700|GO:0006355
Mupr3064g00002 408 SMART rav1_2 44 107 IPR001471 GO:0003700|GO:0006355
Mupr3064g00002 408 Coils Coil 349 369 - -
Mupr3064g00002 408 CDD AP2 43 100 IPR001471 GO:0003700|GO:0006355
Mupr3064g00002 408 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Mupr3064g00002 408 PRINTS Ethylene responsive element binding protein signature 67 83 IPR001471 GO:0003700|GO:0006355
Mupr3064g00002 408 MobiDBLite consensus disorder prediction 222 252 - -
Mupr3064g00002 408 Pfam AP2 domain 44 93 IPR001471 GO:0003700|GO:0006355
Mupr3064g00002 408 Gene3D AP2/ERF domain 43 101 IPR036955 GO:0003700|GO:0006355
Mupr3064g00002 408 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 23 307 - -
Mupr3064g00002 408 SUPERFAMILY DNA-binding domain 44 102 IPR016177 GO:0003677
Mupr3064g00002 408 FunFam ethylene-responsive transcription factor RAP2-11 43 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3064g00002 Mupr-Chr3064 19756 20982 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3064g00002 42 120 AP2-EREBP Transcription Factor Family AT5G19790 72.289 2.39e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr3064g00002 AP2 1.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3064g00002 K09286 - gmx:100796159 640.188