Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3062g00011 ATGTTACTTCATCTACATGTGCAAGCACGGACACATGTTTCACCTAACACAGACGCCAAAGAGAGTCCAAATCGCAGTCACAAAGAGACACCTCCGAAACCCGTGGGGTTTTTGATTTTGATTTTGATTTGGGTTTTGGATTGTGTATTTGGCCGTAGAATTTTGGAATTTGGATTAATGGGTTCCGACATTTGCGTTGTGAATGGTTCGTGCAACCACGAATGGAAGAAGGGGTGGCCTCGGCGATCTGGTGGATTTGCCCAGCTATGCTGCAAGTGCGGATTTATGGAGGACTGGAAGGGTGACATCCTTGATACGCTATCTTCCTACGACAATTCAGTTTTCTGTAATAAATTTCACCGCCAACAAACTGGTTGGAGGGAGTGTAACTTTTGCAACAAGTCTATCCACTGCGGATGCATAGTATCTAAATCTTTGTTCGAGTATCTTGACTTTGGTGGTATAGGTTGTGTTAGCTGTGTAAATACTACCCAACTTAGTATGACGAGGAATACTGAAAATCCAAATGTGTCTGTTTCATCGATAAAAACTAATGCTAGTGATCGACATTCAGCTCATTTTGATGGCAGACTGTTTGTGGGTGGTGTTGATGAAGGAAAGCTTATGCAATTCTGCAAAATTGTTGAAGCTAGTGAATCCAGCCGTTGGAATCATGCTCAAAGAGATGGCATAATTGCTGGTCGTGGGCAAAACAACCAAGAAGCTAAGTGTTCATTCAGGGAAGGGGACATTGGATTTTCCAATGTGATGAAACCATCTGTTCAGTCATTAACATTTGCTACGTTAGAAAATAATAGGTCAACATGGGAGATTAAAAACATACACGAATCAAATGCGCAGCCATCTTTGAGTATGTATCTGGGAAATGCATCGGGGAACAACTCTGTCCCACCTTCTGCTGGAGAGGCTTTAGAAGGAAGAATTGAGGGAAAATCATCTCCCCCTTTTCATCAAGGGCAAAGATCTCGCCCTATATTTCCCAAACCGTTGAAGAGTGGGCTTACCGTGAATGTGGAAACAGATAAAGGTGCAATTTCTCAATCACGTATTGCTCGGCCGCCTGCCGATGGCAAGGGGAAGAATCAGTTACTTCCTCGATACTGGCCAAGGATAACTGATCAAGAGCTGGAGCGTTTGTCTGGGGATTTGAAATCCACTGTAGTTCCATTATTTGAGAAGGTGTTGAGTGCCAGTGATGCAGGTCGAATTGGTCGACTTGTTCTCCCAAAAGCCTGTGCTGAGGCATATTTTCCTCCTATTTCACAATCTGAAGGTGTTCCTTTGCAAATCCAAGACGTGAAGGGGAATGAGTGGACATTTCAGTTCAGATTTTGGCCTAATAACAACAGTAGGATGTATGTATTGGAGGGCGTGACCCCTTGCATACAGTCCATGCAATTATGTGCTGGTGATACTGTAACATTTAGTCGGATAGATCCCGGGAGCAAACTAGTTATGGGTTTCAGAAAGGCATCAAATTCCATGGATACGCAGGATGCCTCCACATCTGCACAATCTAATTCAGCAAAGGGAAACACCTTTTCTTGTGGAACTGAGAATCTCCCATCAAGAAGTAATCATGCTGATCTCCATTCAGTGGCAGGGAATGTGGAACCTCACTTAAATGGACATACTGAACATCTGCATTTGGGTTCTGGAACTGCTGGGGTGCTTAAAACTGAAAATTTTGAGATAACAAACAATAACTCACTACAAATTTCGGTTTTAGAGAAGAAGAGGACTCGCAATATTGGGCCTAAAAGTAAGAGGTTGCTAATTGATAATGAAGATGCTATGGAGTTAAAGCTTACATGGGAAGAAGCACAGGATTTGCTTCGTCCTCCTCCTAGTGTCAGGCCAAGCATTGTCACAATTGAGGACCAAATATTTGAAGAATATGATGTAAGTGAAACGGCTAGCTATTGTGTGGAGCCCCCAGTTTTTGGAAAGAGAACTATATTCAGTGCCTGTTCATCCGGGGGGAAGGAACAATGGGCTCAATGTGATGACTGCTCTAAATGGCGAAAGCTGCCAGTTGATGCTCTTCTTCCTCCCAAGTGGACATGTTCTGAAAATGTTTGGGATTCAAGCAGGTATTCATGCTCTGCACCAGAGGAGCTTAGTTCAAGGGAATTAGACAATCTTCTGAAAACCAACAAAGATTTTAAGAAGCGGCGGATTGTAGAAACCGGCAAGTCAATCCAAGAACATGAGCCTTCCGGCTTGGATGCCCTAGCCAGTGCAGCAGTACTAGGAGAAAATCTCGTTGACACTGCCGAATCATCAGCTGGAGCCACCACCAAACATCCTCGACACCGCCCAGGCTGCTCGTGTATCGTGTGCATTCAGCCCCCAAGCGGAAAGGGGAGACACAAGCCGACATGCACATGCAACGTGTGCATGACGGTGAAACGCCGGTTCAAAACCCTCATGCTAAGAAAGAAGAAGCGCCAATCCGAACGCGAAGCCGATGCTGCCCAGAAAGATCAAGTTCTCCATAAAGACGAGTCAGATACCAATGGAGCATCAAGAGACGAGACTAGTCATCCTCCAAACAGAAGTCAAACTGAAGTGGGCGAGTCCAGTGCTGGACAGATAGATCTGAATTCTCATCCCAATCGTGATGACATGCAAGTGGATATCACAGGACTTAACATGTCTGGTCATCTTGAAACAACAACAAACACAGTGAGTGAGGTTATGAACCAAAATGGGCTAAGAAGCTTTAATAATGAAGTGCAGGCTGGTCAGAATTCTTCTTTGCACAGTCAATCTAATGGAGAAGGTCAGAGATATTTCTCTGATGGAGGATGCTTTTCATCCATAGTGTGGAACCAGGAAAGAAGAGATGAG 2874 0.4433 MLLHLHVQARTHVSPNTDAKESPNRSHKETPPKPVGFLILILIWVLDCVFGRRILEFGLMGSDICVVNGSCNHEWKKGWPRRSGGFAQLCCKCGFMEDWKGDILDTLSSYDNSVFCNKFHRQQTGWRECNFCNKSIHCGCIVSKSLFEYLDFGGIGCVSCVNTTQLSMTRNTENPNVSVSSIKTNASDRHSAHFDGRLFVGGVDEGKLMQFCKIVEASESSRWNHAQRDGIIAGRGQNNQEAKCSFREGDIGFSNVMKPSVQSLTFATLENNRSTWEIKNIHESNAQPSLSMYLGNASGNNSVPPSAGEALEGRIEGKSSPPFHQGQRSRPIFPKPLKSGLTVNVETDKGAISQSRIARPPADGKGKNQLLPRYWPRITDQELERLSGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGVPLQIQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLCAGDTVTFSRIDPGSKLVMGFRKASNSMDTQDASTSAQSNSAKGNTFSCGTENLPSRSNHADLHSVAGNVEPHLNGHTEHLHLGSGTAGVLKTENFEITNNNSLQISVLEKKRTRNIGPKSKRLLIDNEDAMELKLTWEEAQDLLRPPPSVRPSIVTIEDQIFEEYDVSETASYCVEPPVFGKRTIFSACSSGGKEQWAQCDDCSKWRKLPVDALLPPKWTCSENVWDSSRYSCSAPEELSSRELDNLLKTNKDFKKRRIVETGKSIQEHEPSGLDALASAAVLGENLVDTAESSAGATTKHPRHRPGCSCIVCIQPPSGKGRHKPTCTCNVCMTVKRRFKTLMLRKKKRQSEREADAAQKDQVLHKDESDTNGASRDETSHPPNRSQTEVGESSAGQIDLNSHPNRDDMQVDITGLNMSGHLETTTNTVSEVMNQNGLRSFNNEVQAGQNSSLHSQSNGEGQRYFSDGGCFSSIVWNQERRDE 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3062g00011 958 MobiDBLite consensus disorder prediction 319 338 - -
Mupr3062g00011 958 MobiDBLite consensus disorder prediction 819 886 - -
Mupr3062g00011 958 MobiDBLite consensus disorder prediction 503 522 - -
Mupr3062g00011 958 Pfam B3 DNA binding domain 398 497 IPR003340 GO:0003677
Mupr3062g00011 958 SUPERFAMILY DNA-binding pseudobarrel domain 396 500 IPR015300 -
Mupr3062g00011 958 MobiDBLite consensus disorder prediction 851 883 - -
Mupr3062g00011 958 ProSiteProfiles B3 DNA-binding domain profile. 398 499 IPR003340 GO:0003677
Mupr3062g00011 958 Gene3D - 669 724 - -
Mupr3062g00011 958 ProSiteProfiles Zinc finger CW-type profile. 666 716 IPR011124 GO:0008270
Mupr3062g00011 958 MobiDBLite consensus disorder prediction 822 850 - -
Mupr3062g00011 958 CDD B3_DNA 396 497 IPR003340 GO:0003677
Mupr3062g00011 958 FunFam B3 domain-containing transcription repressor VAL1 376 503 - -
Mupr3062g00011 958 SMART B3_2 398 499 IPR003340 GO:0003677
Mupr3062g00011 958 Gene3D - 376 503 IPR015300 -
Mupr3062g00011 958 MobiDBLite consensus disorder prediction 12 31 - -
Mupr3062g00011 958 Pfam CW-type Zinc Finger 671 713 IPR011124 GO:0008270
Mupr3062g00011 958 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 63 924 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3062g00011 Mupr-Chr3062 113794 121488 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3062g00011 60 886 B3 DNA Binding Superfamily AT2G30470 48.982 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr3062g00011 B3 9.3e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3062g00011 K09287 - gmx:100789848 1605.88