Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3062g00004 ATGACTCACTCTCACCAACCAACCCTCAACCTTCACCCCTTTATCCCACAAACCTCAAGCTCTAATTTTGACGCCAACCCACTATGCATAACCTCCAAAAAACCCCAACCACCGCACAAGAAGCTCCTCCGGGTCATCCTCACCGACCACGACGCCACCGACTCCGATTCCTCCGCCGACGATGAAAACCCACCAAAACTCCAAAGACTGAAAAGAAAAATCACCCACATCACCATCAACCTTCCTTTTTCCTCGGAATCCCAAACCCCAACACCTTCTTCATCTTCCTCCCCTGACCCGACCCGTTTTATTCGACCCGAGAAACGGCCCGCTGCCCCTCGCCGTCGGAGCAAGTTCCGCGGCGTCCGCCAGCGACCGTGGGGGCGGTGGACCGCCGAGATCCGCGACCCGACCCGGCGAAAACGGGTCTGGCTCGGCACCTTCGACACGGCCGAGGAAGCCGCCGCCGTGTACGACGAGGCCGCCGTGAAGCTCAAGGGCCCCAACGCCGTCACTAACTTCCCCCTCTCCACCGCCGGTAATACCGCCGACGACCCCCCACCGCTGGAGGCGGCGCTCTCCGGCGACGGTTTTTCCTCTCCGACGTCCGTCCTCGCCTACTGCGACGGCGAATCGACGCCGTTTGACGGTTTCCGTTACGGCGCCGTGGACGCGTTCGGGTTCGACATCGATGCGCCGTTTAGTTTGACGGACGTTAACTCGGGGGTGCTGAGTCGGCGGTTTGGAAAAGAAGAGTTCGGCGAGTTCGACCCTGACGAGTTCCTGACGTGGCCGAAATTGCCAATAAAATTGATAGTGGATAATGGATATGATCAAAATAGATTGAAACGACATTATGATGGAGTATAA 870 0.5793 MTHSHQPTLNLHPFIPQTSSSNFDANPLCITSKKPQPPHKKLLRVILTDHDATDSDSSADDENPPKLQRLKRKITHITINLPFSSESQTPTPSSSSSPDPTRFIRPEKRPAAPRRRSKFRGVRQRPWGRWTAEIRDPTRRKRVWLGTFDTAEEAAAVYDEAAVKLKGPNAVTNFPLSTAGNTADDPPPLEAALSGDGFSSPTSVLAYCDGESTPFDGFRYGAVDAFGFDIDAPFSLTDVNSGVLSRRFGKEEFGEFDPDEFLTWPKLPIKLIVDNGYDQNRLKRHYDGV 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3062g00004 289 SMART rav1_2 118 181 IPR001471 GO:0003700|GO:0006355
Mupr3062g00004 289 SUPERFAMILY DNA-binding domain 117 177 IPR016177 GO:0003677
Mupr3062g00004 289 CDD AP2 117 177 IPR001471 GO:0003700|GO:0006355
Mupr3062g00004 289 ProSiteProfiles AP2/ERF domain profile. 118 175 IPR001471 GO:0003700|GO:0006355
Mupr3062g00004 289 MobiDBLite consensus disorder prediction 80 123 - -
Mupr3062g00004 289 Pfam AP2 domain 117 167 IPR001471 GO:0003700|GO:0006355
Mupr3062g00004 289 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 40 191 - -
Mupr3062g00004 289 PRINTS Ethylene responsive element binding protein signature 119 130 IPR001471 GO:0003700|GO:0006355
Mupr3062g00004 289 PRINTS Ethylene responsive element binding protein signature 141 157 IPR001471 GO:0003700|GO:0006355
Mupr3062g00004 289 MobiDBLite consensus disorder prediction 1 21 - -
Mupr3062g00004 289 MobiDBLite consensus disorder prediction 80 101 - -
Mupr3062g00004 289 PIRSF PTI6 13 266 IPR017392 GO:0003700
Mupr3062g00004 289 FunFam Ethylene-responsive transcription factor 2 117 176 - -
Mupr3062g00004 289 Gene3D AP2/ERF domain 117 177 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3062g00004 Mupr-Chr3062 38717 40367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3062g00004 41 207 AP2-EREBP Transcription Factor Family AT4G27950 43.889 7.66e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr3062g00004 AP2 3.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3062g00004 K13434 - gmx:102660028 375.17