Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr305g00002 GTGTTGGGCGGTAGTGAAAGGAGTGGTGGTGCGGGCAAGAGGCGTAAGTTGTTTTTGTTAGAGCAAGGAACGCGGAAATGGGGTGGGTCCCAGCAATGGAGAAGCGGAGGCGAGGGTGATGATTGTGATGGCGGAAGCAGAGAGAAAGAAAGCAATAGAGGAATGGCAGTGGCATCGCGGCCTTGGTTGAAATTGAACGCCTCTTCACTCATTCTGATCCTCTTCCTCGTTCTGGTTCTGATCTTCTTCTCCGTAAACCCTTCCTCTTCTCCTATCCCTATATCTCCACGTAGGTCACTTGTTGTTACTCCCTCACCCTGCACCTTAGACTCCAATGGCCTCCTCAACTATCACTGCCTCTTCCCCCACACCTCCACCCTCTCCCTCCCCTCCCTTTCCCTCTTCCTCCTCCTCCACTTCTACATCCTCATCACCACCGCTCAGCATCACTTCTCCATCGTCACCACCAAACTCGCCTCTCACCTCAACCTCTCCCCCAGCATGGCCGCCGTCACCCTCCTCTCCCTCGGCAACGGCGCTCCCGACGTCTTCGCCTCCCTCGCCGCCCTCCGCGCCGGCCAGTACCGCACCGGCTTCGGCGCCATCCTTTCCGCCGGAACCTTCGTTTCCGCCCTCGTTGTCGGCTTCGTCGCCATCTACGCCGCGCCCTTTCCCGTCGATCCCGCGCCCTTCGTTAGGGACGTCCTCTTCTATCTCACCGCCGCCTTCTTTCTCTTCTACGTCTATCTCAGCGCCGAGATTTTCCTCTGGCAGGCCCTCGGATTCGTTGGATTCTATTTCTTCTTCGTAGGTTTCGTGTTCTACATGGATTTGGGGATGGCCAATCGCAGGGAAAAGAGTTCCGCTGATCTCGAGGGACACATGGAACCGGATAACGACCTCGACGTTTCGGGATCTACCGACGGAGAGAAACGCGTTTCTGGATTTCGTCGAGCAATTCGATTGATTTCTAAAGCATGGGAGCTTCCTGTTTCGACTCTCTTAAGATTGACAATCCCTCAACCAGCACCATCACAATGGAGCAGATTTTATGCATCCGCCAATATTGCACTCTGTCCACTAGCCCTCTTGTATGCCTGCAACTCATTCATGCCATTTAATCATCCCATAGTTTTCCTCCTCCCCAACATTCACTTCCCCCTCTGGTCAGTAGTGCTTGTGACGAGTTTCTCTCTTGCATTTCTTCATTTTGTAATGGAAAAAGAACCCCCGAAAACAGAGCATATGCCTGTGGTCGTCATGGCATTTGTGATGAGCGTATTTTGGATATCTACTACAGCCGGAGAGCTGGTGAACTGCCTGGAAGCTATAGGCATCCTTCTGAAGCTGCCACCATCACTTCTGGGTCTAACAGTGCTGGCATGGGGAAATTCAGTGGGAGATCTTGTTGCTGATGTTGCAGTTGCGAAAGCTGGTCATCCAGCAATGGCAATGGCGGGATGCTTTGCAGGACCAATGTTTAACATGCTTGTTGGCCTTGGAACTGCTTTGGTCATACAGACGGTCAATATATATCCTAGAGCTTATCAGCTTAATTTCCACGTTGGTATCGTGATTGCATTTGTATTCCTGCTTTTAAGCCTTATGGGGTCTCTGTTGGTCATCACTTGGTGCAGATTCAGAGTGCCTAGGTTTTGGGGATTCTGTCTGGTAGGCGTCTATGTTGCTTTCATGGCAGCGAGTGTACTAATAGCCATGTTTTCAGGAATGGATCATCAAGGGCATAGCCAGAACCCATCTATGGGGGTTGTCGGTAGTGGAGCTCAATTAACATATGGATCTAACCCATATCAGCCAGGCCAAATAACTGGGGCCCCGGGGTCGGTTGTGACATCTGTTGGGACCATTCAATCCAGCAGTCAACCTGCTGGAGCTCAGCTGGGACAGCATCAACTTGCTTATCAGCATATTCATCAGCAACAACAGCACCAGCTTCAGCAACAGCTCCAACAGTTTTGGTCAAATCAGTACCAAGAAATTGAGAAGGTTACTGATTTCAAGAACCACAGTCTTCCCCTGGCAAGGATCAAGAAGATTATGAAGGCTGATGAGGATGTCAGAATGATATCGGCTGAGGCACCAGTCATCTTTGCAAGGGCATGTGAAATGTTCATATTGGAGTTAACCCTGCGTTCTTGGAATCACACTGAAGAGAACAAAAGGCGAACACTTCAGAAAAATGACATTGCTGCAGCAATCACAAGGACTGACATCTTTGATTTCTTGGTTGACATTGTGCCTCGTGAGGACTTGAAAGATGAAGTGCTTGCATCAATCCCAAGAGGAACAATGCCTGTTGCAGGGCCTGCTGATGCACTTCCATACTGCTATATGCCGCCTCAGCATGCGCCTCAAGTTGGACCTGCTGGTGTCATAATGGGTAAGCCTGTGATGGACCCCAACATGTATGCTCAGCAGTCTCACCCCTACATGGCACCACATATGTGGCCACAGCCACCAGACCAAAGACAGTCATCTCCAGAACAT 2508 0.5068 VLGGSERSGGAGKRRKLFLLEQGTRKWGGSQQWRSGGEGDDCDGGSREKESNRGMAVASRPWLKLNASSLILILFLVLVLIFFSVNPSSSPIPISPRRSLVVTPSPCTLDSNGLLNYHCLFPHTSTLSLPSLSLFLLLHFYILITTAQHHFSIVTTKLASHLNLSPSMAAVTLLSLGNGAPDVFASLAALRAGQYRTGFGAILSAGTFVSALVVGFVAIYAAPFPVDPAPFVRDVLFYLTAAFFLFYVYLSAEIFLWQALGFVGFYFFFVGFVFYMDLGMANRREKSSADLEGHMEPDNDLDVSGSTDGEKRVSGFRRAIRLISKAWELPVSTLLRLTIPQPAPSQWSRFYASANIALCPLALLYACNSFMPFNHPIVFLLPNIHFPLWSVVLVTSFSLAFLHFVMEKEPPKTEHMPVVVMAFVMSVFWISTTAGELVNCLEAIGILLKLPPSLLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGTALVIQTVNIYPRAYQLNFHVGIVIAFVFLLLSLMGSLLVITWCRFRVPRFWGFCLVGVYVAFMAASVLIAMFSGMDHQGHSQNPSMGVVGSGAQLTYGSNPYQPGQITGAPGSVVTSVGTIQSSSQPAGAQLGQHQLAYQHIHQQQQHQLQQQLQQFWSNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALPYCYMPPQHAPQVGPAGVIMGKPVMDPNMYAQQSHPYMAPHMWPQPPDQRQSSPEH 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr305g00002 836 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 323 575 - -
Mupr305g00002 836 Pfam Sodium/calcium exchanger protein 133 274 IPR004837 GO:0016020|GO:0055085
Mupr305g00002 836 Pfam Sodium/calcium exchanger protein 420 568 IPR004837 GO:0016020|GO:0055085
Mupr305g00002 836 FunFam Nuclear transcription factor Y subunit gamma 642 755 - -
Mupr305g00002 836 MobiDBLite consensus disorder prediction 817 836 - -
Mupr305g00002 836 SUPERFAMILY Histone-fold 649 749 IPR009072 GO:0046982
Mupr305g00002 836 MobiDBLite consensus disorder prediction 26 52 - -
Mupr305g00002 836 Gene3D Histone, subunit A 639 755 IPR009072 GO:0046982
Mupr305g00002 836 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 677 740 IPR003958 -
Mupr305g00002 836 Gene3D - 352 570 IPR044880 -
Mupr305g00002 836 Gene3D - 164 289 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr305g00002 Mupr-Chr305 7467 20421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr305g00002 63 575 Antiporters AT1G08960 66.239 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mupr305g00002 Na_Ca_ex 3.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr305g00002 K13754 - gmx:100775437 793.497