Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3034g00015 ATGGCTCGTGGAAAGGTTCAGCTGAAGCGAATTGAGAACTCAGTGCACAGACAAGTTACCTTCTGCAAGCGCCGAGCAGGGCTTCTTAAGAAGGCTAAGGAACTCTCTGTGCTGTGCGATGCTGAAATTGGCATCCTCATTTTCTCCGCCCATGGAAAGCTCTATGAACTCGCCACCAAAGGGTCTCTTTCTCTCTCTCTCTCTCAAACCAACATAAGCATGCAAGGGCTCATTGAGAGGTACATGAAGTTCACACCAGGGGCTCAGCCTGAAGCACCACCTCAACAACCACATCCTCTGGATGCAAAAGAGGAAACCAATGTGCTAAAACAAGAAATCCAAACATTGCAAAAGGGTATCAGGTATTTATTTGGAGGAGGAAATAAGACAATGACAATGGATGAATTACAAGTGCTAGAGAAGAATCTTGAAATGTGGATATATCATATTCGTTCAATGAAGATGAATATCATGTTACAAGAAATTCAAGCCTTGAAAGAAAAGGAGGGAACACTTAAAGCGACAAATAAATATCTCCACGATAAGATTGTGGAGAATACTGTAGTTTCTAACTTTACTTCATTTGCAACTGATGATACTTCGTACCCGCTAATTATACAAGATGGGTTAGCATATTGGTCCAACCCACCACCAACCAGCTTCAGGCCCATTTTGAATATGAATGTGAATCTTTCAGAGTTTGCTTTCGTGAATTCTTCCCCCCGACCCGAGGATGTGCTCCAACGTACACATGAATTCAGAAATTCAGAATCTCTTTTCAAATTAAAATAA 792 0.4167 MARGKVQLKRIENSVHRQVTFCKRRAGLLKKAKELSVLCDAEIGILIFSAHGKLYELATKGSLSLSLSQTNISMQGLIERYMKFTPGAQPEAPPQQPHPLDAKEETNVLKQEIQTLQKGIRYLFGGGNKTMTMDELQVLEKNLEMWIYHIRSMKMNIMLQEIQALKEKEGTLKATNKYLHDKIVENTVVSNFTSFATDDTSYPLIIQDGLAYWSNPPPTSFRPILNMNVNLSEFAFVNSSPRPEDVLQRTHEFRNSESLFKLK 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3034g00015 263 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Mupr3034g00015 263 SUPERFAMILY SRF-like 1 79 IPR036879 GO:0003677|GO:0046983
Mupr3034g00015 263 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Mupr3034g00015 263 Gene3D - 14 87 IPR036879 GO:0003677|GO:0046983
Mupr3034g00015 263 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 56 IPR002100 GO:0003677|GO:0046983
Mupr3034g00015 263 CDD MADS_MEF2_like 2 85 IPR033896 GO:0000977|GO:0045944
Mupr3034g00015 263 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 173 - -
Mupr3034g00015 263 Pfam K-box region 101 183 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mupr3034g00015 263 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Mupr3034g00015 263 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Mupr3034g00015 263 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Mupr3034g00015 263 ProSiteProfiles K-box domain profile. 99 189 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mupr3034g00015 263 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3034g00015 Mupr-Chr3034 113922 118565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3034g00015 1 206 MADS-box Gene Family AT1G71692 58.796 7.95e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Mupr3034g00015 K-box 8.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3034g00015 - - gmx:100783345 322.783