Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3017g00001 ATGGAGGGTGGTGATGTTGGGCGTTGGGCGTTAGAGTTCCTTCTTGGGAACCCACTCGCAGACAGTAACCCAATCAAGAAAGTGATTCGGAAAATCCCCGTTTCAGACGCTGATTCCCGCCTCAAGAAGACCCTTCTCCTCAAAACCCTTCAAGATCACTTATCCTCCGTCTCCATTTCCGAACCCGTTCTCCAAACCCTCGAGCTCCTTGAGGAACTCCACCGCCGCGACGCCTCTCCGGTCACCCCTGCCATGAGCACCGCCTACTGCGCCGTCGCGGTGGATTGCACGCTCAAGTACCTGCCACTGGAACCCCACCACCACAACCCTGCCTACCTCAGCGCCGTGAACAGGATATGGCGCGGTAGGGTTAGCCACATGAACGGTTCGGCTTCCGGCGAGGGAAGCCTTTTGTTCTCGCCGGAGTTGAAGCGGTGGAAAATCGACATCGAAGCTTCCCTTTCGGACTCGCAAGTGAGGGAGAGATTGGCCTCCATTGTCGATACCAGGAGAGACGCCATCATCAAGCTCAAGCTCTATTTGGCCGAGGAATGGGCCAATTTGGGCCCTTCCTTTCTTCAGGTAGTGGCGTCGATGCACCTAAACAAGGCCCCAATCGCCAATCACTCGGAGGCCCAACAACACCAAGAGAGAGAAATTCAGAAGTGTAGTAGTGCTGCCGCTGAGGAAGTGCATCCATCAATAACTATTGAAGTCCCAAAGGTTGGGGAATGTAGTTCTGTAGAGTTGCAAACGTTGGTTAAGGATTCTCTACTTAATTCATCGGAAGTGAATGAGGAGGTACATGTCCAAAAACAGAGTACACATGCAGATGTGCCTTGTCCAAATAGTGTTAATGATAATGATGCTGATCTGATGGAAGAGCAGCAAACTTCTGTCCCTCAGAATCACAATCATGGGCCAAGTTTGATGGAAAAAAATAGTACTGCTCGAACTTACGAGTGGGATGATTCCATAGACGGCTTGCAGGGTGGAACATCAAATCGCGCAAGTACAATACATTTGCCTAGCCCCAAGGGTAGAAAACTTTCTCCATTGAAGAAGTATGTATCAGCAAAGATTACAAAGAGGAGAAAAGCCAAAAAATGGAGTCAGTTGGAAGAGGAGACTCTAAAGACTGCCGTAAACAAGTTTGGCAAGGGAAATTGGAAGTTAATTCTAAATTCTCACAGAGATATATTTGAAGAGAGAACTGAAGTTGATTTGAAGGACAAATGGAGAAACCTGACGCGAAGGAAATGTAATTATAAAATCTAA 1278 0.4836 MEGGDVGRWALEFLLGNPLADSNPIKKVIRKIPVSDADSRLKKTLLLKTLQDHLSSVSISEPVLQTLELLEELHRRDASPVTPAMSTAYCAVAVDCTLKYLPLEPHHHNPAYLSAVNRIWRGRVSHMNGSASGEGSLLFSPELKRWKIDIEASLSDSQVRERLASIVDTRRDAIIKLKLYLAEEWANLGPSFLQVVASMHLNKAPIANHSEAQQHQEREIQKCSSAAAEEVHPSITIEVPKVGECSSVELQTLVKDSLLNSSEVNEEVHVQKQSTHADVPCPNSVNDNDADLMEEQQTSVPQNHNHGPSLMEKNSTARTYEWDDSIDGLQGGTSNRASTIHLPSPKGRKLSPLKKYVSAKITKRRKAKKWSQLEEETLKTAVNKFGKGNWKLILNSHRDIFEERTEVDLKDKWRNLTRRKCNYKI 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3017g00001 425 Gene3D - 370 424 - -
Mupr3017g00001 425 SMART sant 366 419 IPR001005 -
Mupr3017g00001 425 ProSiteProfiles Myb-like domain profile. 362 417 IPR001005 -
Mupr3017g00001 425 SUPERFAMILY Homeodomain-like 364 418 IPR009057 -
Mupr3017g00001 425 Pfam Myb-like DNA-binding domain 368 416 IPR001005 -
Mupr3017g00001 425 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 362 421 IPR017930 -
Mupr3017g00001 425 PANTHER MYB TRANSCRIPTION FACTOR 5 418 - -
Mupr3017g00001 425 CDD SANT_TRF 368 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3017g00001 Mupr-Chr3017 5477 7629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3017g00001 6 420 Single Myb Histone (SMH) Gene Family AT1G15720 27.230 1.08e-28 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr3017g00001 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3017g00001 - K11111 ccaj:109817184 555.829