Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3012g00004 ATGGTGAATTCCAAGCTGGGAACTCTTCATTTCACTGTTGTCCAACAAGGCTCATTGTGGATTATATTTGAGCGCAGCATAACCATTGAGTTGAGGCAAGAGCTCTTGATTTCCTCCAATAGTACCATTGATGGTCGTGGTGCGGACGTTGGTCTCACCATGCAATATGTGAACAATGTCCTCATCCATGGAATTCGCGTCAAGAAAATCATGCCCAAAGATGGCAACATGATTAGGAACTCCTACAACCACTTTGGGTTGAGGATAAGGAGCGACGATCATGTTTTCCTCTCTGACTCTATTGATGGTCTTATCGATGTCATCATAGGCTCCACTGTTGTCACCATCTCAAATTGCCACTTAAGCAACCATAACAATGTGATGCTATTTGGGGCTAGATACTAG 405 0.437 MVNSKLGTLHFTVVQQGSLWIIFERSITIELRQELLISSNSTIDGRGADVGLTMQYVNNVLIHGIRVKKIMPKDGNMIRNSYNHFGLRIRSDDHVFLSDSIDGLIDVIIGSTVVTISNCHLSNHNNVMLFGARY 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3012g00004 134 PANTHER PECTATE LYASE 18-RELATED 1 132 IPR045032 GO:0030570
Mupr3012g00004 134 SUPERFAMILY Pectin lyase-like 2 132 IPR011050 -
Mupr3012g00004 134 PRINTS Pollen allergen Amb family signature 34 50 IPR018082 -
Mupr3012g00004 134 PRINTS Pollen allergen Amb family signature 102 123 IPR018082 -
Mupr3012g00004 134 Gene3D - 1 134 IPR012334 -
Mupr3012g00004 134 SMART amb_all 26 133 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3012g00004 Mupr-Chr3012 27635 28095 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3012g00004 1 133 Polysaccharide Lyase AT1G14420 51.634 1.07e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3012g00004 K01728 - gmx:100785801 176.022