Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr300g00009 ATGGAGTCTCCCGATGAAACAGGATGCCAGGCTCCGGAACGTCCGATACTTTGCATTAACAATTGTGGGTTTTTTGGAAGGGAGGCTACCATGAATATGTGCTCCAAATGTTACAAAGACATGCTGTTGAAGCAGGAGCAGGACAAACTTGCAGCAGCATCAGTTGAAAACATTGTGAATGGAGGTTCTGGCTGCACTGGGAAACAGGTTGTGGCTGCAGGTTCTGTGGATGTACAAGTTGGAAGCGGGGAGGCCAAGGTAGTCTGTGCTGAGATTTCTGGGGGTTCATCCTCTGGTGAGAATTTGGAGATGAAGGTTAAGACAGGTCCCAGCAGATGTGCTACTTGCCGGAAGCGTGTTGGATTAACTGGTTTCAGCTGCAAATGTGGAAACCTCTTTTGTGCAACACACCGCTATTCTGACAAACATGATTGCACCTTTGATTATCAGACTGTTGGTCGGGATGCTATAGCTAAAGCCAATCCCAACACATGGAACTCAAGCAGGAAGTCTCCTGCACAGAAGAAATACTGCTCAAGAGATAGAAACACAGATACTGGAACCGGAAAAAGAAAAATGGGGGACTTGGTGCGTGAGTCTTCCACCAACTGGGGTTTGGCGAAGGGGGATGTCCGCAGCCTTACCCACGAAGCAGAGAGGCTTAATGGTGGGGACTGGAATCTGCTTGACCTGATCAATAGTTGTTCCTCAAATGTTTAA 720 0.4778 MESPDETGCQAPERPILCINNCGFFGREATMNMCSKCYKDMLLKQEQDKLAAASVENIVNGGSGCTGKQVVAAGSVDVQVGSGEAKVVCAEISGGSSSGENLEMKVKTGPSRCATCRKRVGLTGFSCKCGNLFCATHRYSDKHDCTFDYQTVGRDAIAKANPNTWNSSRKSPAQKKYCSRDRNTDTGTGKRKMGDLVRESSTNWGLAKGDVRSLTHEAERLNGGDWNLLDLINSCSSNV 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr300g00009 239 ProSiteProfiles Zinc finger AN1-type profile. 107 153 IPR000058 GO:0008270
Mupr300g00009 239 MobiDBLite consensus disorder prediction 174 193 - -
Mupr300g00009 239 SUPERFAMILY AN1-like Zinc finger 104 164 IPR035896 -
Mupr300g00009 239 Pfam AN1-like Zinc finger 113 150 IPR000058 GO:0008270
Mupr300g00009 239 PANTHER AN1-TYPE ZINC FINGER PROTEIN 14 165 - -
Mupr300g00009 239 Gene3D - 93 169 IPR035896 -
Mupr300g00009 239 FunFam Zinc finger AN1-type containing 6 91 167 - -
Mupr300g00009 239 Gene3D - 5 59 - -
Mupr300g00009 239 SMART AN1_Zf_4 113 150 IPR000058 GO:0008270
Mupr300g00009 239 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Mupr300g00009 239 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Mupr300g00009 239 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Mupr300g00009 239 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Mupr300g00009 239 MobiDBLite consensus disorder prediction 161 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr300g00009 Mupr-Chr300 30584 33639 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr300g00009 5 162 C2H2 Transcription Factor Family AT3G52800 40.252 2.91e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr300g00009 - - gmx:100499995 280.026